RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 STEAP1Q9UHE8 339 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 SNRPGP15A8MWD9 76 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 RBBP9O75884 186 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 TPPPO94811 219 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 AKR7A3O95154 331 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 IL33O95760 270 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 IL5P05113 134 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 MST1P26927 711 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 RPS27P42677 84 aaKnown RBP16.99■□□□□ 0.31
CPSF3-201ENST00000238112 ZSCAN1Q8NBB4 408 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 OR8K3Q8NH51 312 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 OIT3Q8WWZ8 545 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 INTS14Q96SY0 518 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 UTP23Q9BRU9 249 aaKnown RBP16.99■□□□□ 0.31
CPSF3-201ENST00000238112 S1PR5Q9H228 398 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 CDV3Q9UKY7 258 aaKnown RBP16.99■□□□□ 0.31
CPSF3-201ENST00000238112 H3BSH0 61 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 XRCC3O43542 346 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 ALOX5APP20292 161 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 TACR3P29371 465 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 BLKP51451 505 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 SCAND1P57086 179 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 RAP2BP61225 183 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 RASGEF1BQ0VAM2 473 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 OPCMLQ14982 345 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 PCGF3Q3KNV8 242 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 COL13A1Q5TAT6 717 aaPredicted RBP16.98■□□□□ 0.31
CPSF3-201ENST00000238112 KIAA0895LQ68EN5 471 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 SYT4Q9H2B2 425 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 PNO1Q9NRX1 252 aaKnown RBP16.98■□□□□ 0.31
CPSF3-201ENST00000238112 PIPOXQ9P0Z9 390 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 GMEB2Q9UKD1 530 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 TRBV5-7A0A0A0MS05 114 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 CIB4A0PJX0 185 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 GALNSP34059 522 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 IDO2Q6ZQW0 420 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 SIX5Q8N196 739 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 OR51A4Q8NGJ6 313 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 OR10AC1Q8NH08 325 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 ELMOD3Q96FG2 381 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 GSX2Q9BZM3 304 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 CLEC1BQ9P126 229 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 NUP50Q9UKX7 468 aa16.98■□□□□ 0.31
CPSF3-201ENST00000238112 TMEM184BQ9Y519 407 aaPredicted RBP16.98■□□□□ 0.31
CPSF3-201ENST00000238112 RANBP2P49792 3224 aaKnown RBP16.98■□□□□ 0.31
CPSF3-201ENST00000238112 L7N2F9 121 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 PHYHO14832 338 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 MECP2P51608 486 aaKnown RBP16.97■□□□□ 0.31
CPSF3-201ENST00000238112 CCINQ13939 588 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 SHHQ15465 462 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 EEF1A1P5Q5VTE0 462 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 HDDC2Q7Z4H3 204 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 TSEN15Q8WW01 171 aaKnown RBP16.97■□□□□ 0.31
CPSF3-201ENST00000238112 TAAR8Q969N4 342 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 ULBP3Q9BZM4 244 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 NXF5Q9H1B4 397 aaKnown RBP16.97■□□□□ 0.31
CPSF3-201ENST00000238112 SOHLH2Q9NX45 425 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 MMP17Q9ULZ9 603 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 GMFGO60234 142 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 HRGP04196 525 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 PPICP45877 212 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 CAPZBP47756 277 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 CCR5P51681 352 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 SLC37A1P57057 533 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 DHODHQ02127 395 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 PLA2G7Q13093 441 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 RBMS2Q15434 407 aaKnown RBP16.97■□□□□ 0.31
CPSF3-201ENST00000238112 MAMSTRQ6ZN01 415 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 DNM1P46Q6ZS02 220 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 ZNF321PQ8N8H1 164 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 TOE1Q96GM8 510 aaKnown RBP16.97■□□□□ 0.31
CPSF3-201ENST00000238112 ELF4Q99607 663 aaPredicted RBP16.97■□□□□ 0.31
CPSF3-201ENST00000238112 LRRC61Q9BV99 259 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 TAS2R8Q9NYW2 309 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 MRTO4Q9UKD2 239 aaKnown RBP16.97■□□□□ 0.31
CPSF3-201ENST00000238112 CYP8B1Q9UNU6 501 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 PLCL2Q9UPR0 1127 aa16.97■□□□□ 0.31
CPSF3-201ENST00000238112 A0A1W2PPL8 197 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 PLSCR5A0PG75 271 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 UBE2QL1A1L167 161 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 HSPB2A8KAH6 182 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 B8ZZF3 427 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 H0YC42 278 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 H7C417 338 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 SNAPC5O75971 98 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 GPANK1O95872 356 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 PROS1P07225 676 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 CSF1P09603 554 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 RRASP10301 218 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 DLX2Q07687 328 aaPredicted RBP16.96■□□□□ 0.31
CPSF3-201ENST00000238112 HSPB2Q16082 182 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 AANATQ16613 207 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 KANSL1Q7Z3B3 1105 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 PM20D2Q8IYS1 436 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 PRSS35Q8N3Z0 413 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 ZNF524Q96C55 264 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 OMA1Q96E52 524 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 DCBLD2Q96PD2 775 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 ADOQ96SZ5 270 aa16.96■□□□□ 0.31
CPSF3-201ENST00000238112 MTFP1Q9UDX5 166 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms