RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 XKR8Q9H6D3 395 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 PFDN2Q9UHV9 154 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 KCNE5Q9UJ90 142 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 FLVCR2Q9UPI3 526 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 ZNF281Q9Y2X9 895 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 IGHV1OR21-1A0A087WYE8 117 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 A0A1W2PQM1 296 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 LILRA5A6NI73 299 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 ARPC3O15145 178 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 RP2O75695 350 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 MELTFP08582 738 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 ADRB1P08588 477 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 CLUP10909 449 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 RAD52P43351 418 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 P2RX1P51575 399 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 SLC16A1P53985 500 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 PSMA6P60900 246 aaKnown RBP18.7■□□□□ 0.58
SNX3-201ENST00000230085 CCL7P80098 99 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 PLAURQ03405 335 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 ZNF684Q5T5D7 378 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 SLC6A19Q695T7 634 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 CHMP1BQ7LBR1 199 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 SLC36A1Q7Z2H8 476 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 BVESQ8NE79 360 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 LCN9Q8WX39 176 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 SGTBQ96EQ0 304 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 DERL3Q96Q80 235 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 TRIM2Q9C040 744 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 OR10A4Q9H209 315 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 SYNPO2LQ9H987 977 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 CA10Q9NS85 328 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 TAS2R8Q9NYW2 309 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 OPN4Q9UHM6 478 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 V9GY05 133 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 GXYLT2A0PJZ3 443 aa18.69■□□□□ 0.58
SNX3-201ENST00000230085 BRINP1O60477 761 aa18.69■□□□□ 0.58
SNX3-201ENST00000230085 CTNSO60931 367 aa18.69■□□□□ 0.58
SNX3-201ENST00000230085 CPMP14384 443 aa18.69■□□□□ 0.58
SNX3-201ENST00000230085 HOXB3P14651 431 aaPredicted RBP18.69■□□□□ 0.58
SNX3-201ENST00000230085 ATF4P18848 351 aaPredicted RBP18.69■□□□□ 0.58
SNX3-201ENST00000230085 FAUP35544 74 aaKnown RBP18.69■□□□□ 0.58
SNX3-201ENST00000230085 CNOT9Q92600 299 aaKnown RBP18.69■□□□□ 0.58
SNX3-201ENST00000230085 NOX4Q9NPH5 578 aa18.69■□□□□ 0.58
SNX3-201ENST00000230085 TAS2R10Q9NYW0 307 aa18.69■□□□□ 0.58
SNX3-201ENST00000230085 SLC22A23A1A5C7 686 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 TOXO94900 526 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 FTH1P19P0C7X4 201 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 CD1CP29017 333 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 PPM1FP49593 454 aaPredicted RBP18.68■□□□□ 0.58
SNX3-201ENST00000230085 BTN3A2P78410 334 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 SSBP1Q04837 148 aaKnown RBP18.68■□□□□ 0.58
SNX3-201ENST00000230085 GPR68Q15743 365 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 LINC00303Q3SY05 128 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 RNASE12Q5GAN4 147 aaKnown RBP18.68■□□□□ 0.58
SNX3-201ENST00000230085 SLC25A25Q6KCM7 469 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 LRRN1Q6UXK5 716 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 RSC1A1Q92681 617 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 MACROD1Q9BQ69 325 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 SRMSQ9H3Y6 488 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 LYRM4Q9HD34 91 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 NKIRAS2Q9NYR9 191 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 MED11Q9P086 117 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 FBXL4Q9UKA2 621 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 ATXN7L1Q9ULK2 861 aaPredicted RBP18.68■□□□□ 0.58
SNX3-201ENST00000230085 CLEC4AQ9UMR7 237 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 PCDHGA1Q9Y5H4 931 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 NDUFB2O95178 105 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 EDNRAP25101 427 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 CFHR1Q03591 330 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 SYT9Q86SS6 491 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 RFLNBQ8N5W9 214 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 OR52H1Q8NGJ2 320 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 OR5M9Q8NGP3 310 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 OR10G6Q8NH81 332 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 SNX33Q8WV41 574 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 SEC22CQ9BRL7 303 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 ALX4Q9H161 411 aaPredicted RBP18.68■□□□□ 0.58
SNX3-201ENST00000230085 ENTPD2Q9Y5L3 495 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 SLC22A7Q9Y694 548 aa18.68■□□□□ 0.58
SNX3-201ENST00000230085 SPTBN4Q9H254 2564 aa18.67■□□□□ 0.58
SNX3-201ENST00000230085 TRAV27A0A087WT01 109 aa18.67■□□□□ 0.58
SNX3-201ENST00000230085 OR6C74A6NCV1 312 aa18.67■□□□□ 0.58
SNX3-201ENST00000230085 KHDRBS3O75525 346 aaKnown RBP18.67■□□□□ 0.58
SNX3-201ENST00000230085 IGF2P01344 180 aa18.67■□□□□ 0.58
SNX3-201ENST00000230085 GKN3PP0CG01 181 aa18.67■□□□□ 0.58
SNX3-201ENST00000230085 RPA2P15927 270 aa18.67■□□□□ 0.58
SNX3-201ENST00000230085 TLX1P31314 330 aaPredicted RBP18.67■□□□□ 0.58
SNX3-201ENST00000230085 RBMS2Q15434 407 aaKnown RBP18.67■□□□□ 0.58
SNX3-201ENST00000230085 TMEM69Q5SWH9 247 aa18.67■□□□□ 0.58
SNX3-201ENST00000230085 DHRS13Q6UX07 377 aa18.67■□□□□ 0.58
SNX3-201ENST00000230085 TMUB2Q71RG4 321 aa18.67■□□□□ 0.58
SNX3-201ENST00000230085 TMPRSS9Q7Z410 1059 aa18.67■□□□□ 0.58
SNX3-201ENST00000230085 CYB561A3Q8NBI2 242 aa18.67■□□□□ 0.58
SNX3-201ENST00000230085 OR10Z1Q8NGY1 313 aa18.67■□□□□ 0.58
SNX3-201ENST00000230085 OR6K3Q8NGY3 331 aa18.67■□□□□ 0.58
SNX3-201ENST00000230085 RNF166Q96A37 237 aaPredicted RBP18.67■□□□□ 0.58
SNX3-201ENST00000230085 TNFRSF13CQ96RJ3 184 aa18.67■□□□□ 0.58
SNX3-201ENST00000230085 GPX7Q96SL4 187 aaPredicted RBP18.67■□□□□ 0.58
SNX3-201ENST00000230085 OR5V1Q9UGF6 321 aa18.67■□□□□ 0.58
SNX3-201ENST00000230085 UBE2QL1A1L167 161 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms