RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 XKRYO14609 159 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 ZNF208O43345 1280 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 LAMTOR5O43504 91 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 GDF9O60383 454 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 TRIM3O75382 744 aaPredicted RBP17.24■□□□□ 0.35
YBX3-201ENST00000228251 ZFAND5O76080 213 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 PLGP00747 810 aaPredicted RBP17.24■□□□□ 0.35
YBX3-201ENST00000228251 SNRPBP14678 240 aaKnown RBP17.24■□□□□ 0.35
YBX3-201ENST00000228251 IL11P20809 199 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 APOBEC1P41238 236 aaKnown RBP17.24■□□□□ 0.35
YBX3-201ENST00000228251 MS4A18Q3C1V0 323 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 BICRALQ6AI39 1079 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 PYHIN1Q6K0P9 492 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 FAM220AQ7Z4H9 259 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 MFSD8Q8NHS3 518 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 CMTM3Q96MX0 182 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 TSPAN10Q9H1Z9 355 aaPredicted RBP17.24■□□□□ 0.35
YBX3-201ENST00000228251 LAMP5Q9UJQ1 280 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 SPATA2Q9UM82 520 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 TECTAO75443 2155 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 VPS13AQ96RL7 3174 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 LOC102723996A0A087X1L8 192 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 NPIPB13A6NJU9 1138 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 NPIPB4C9JG80 1138 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 PHYHO14832 338 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 TMEM127O75204 238 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 KRT8P05787 483 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 FBXO45P0C2W1 286 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 CTLA4P16410 223 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 TALDO1P37837 337 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 MAGEB1P43366 347 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 CENPAP49450 140 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 ZFP36L1Q07352 338 aaKnown RBP17.23■□□□□ 0.35
YBX3-201ENST00000228251 PHF19Q5T6S3 580 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 ARSKQ6UWY0 536 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 YIPF7Q8N8F6 280 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 OR2G2Q8NGZ5 317 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 ORAI1Q96D31 301 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 ST6GAL2Q96JF0 529 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 ARL5BQ96KC2 179 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 GFM1Q96RP9 751 aaKnown RBP17.23■□□□□ 0.35
YBX3-201ENST00000228251 FANCFQ9NPI8 374 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 MED11Q9P086 117 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 KCNG2Q9UJ96 466 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 FREM3P0C091 2139 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 TFECO14948 347 aaPredicted RBP17.23■□□□□ 0.35
YBX3-201ENST00000228251 EFNA2O43921 213 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 PRKAR1AP10644 381 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 ZNF28P17035 718 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 RPS27P42677 84 aaKnown RBP17.23■□□□□ 0.35
YBX3-201ENST00000228251 MZT2BQ6NZ67 158 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 ENKURQ8TC29 256 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 ELP5Q8TE02 316 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 CTRCQ99895 268 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 SLCO1C1Q9NYB5 712 aa17.23■□□□□ 0.35
YBX3-201ENST00000228251 C19orf25Q9UFG5 118 aaPredicted RBP17.23■□□□□ 0.35
YBX3-201ENST00000228251 TRBV5-7A0A0A0MS05 114 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 HMX3A6NHT5 357 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 SLC43A1O75387 559 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 CCNKO75909 580 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 FRYLO94915 3013 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 RPP14O95059 124 aaKnown RBP17.22■□□□□ 0.35
YBX3-201ENST00000228251 HLA-DOBP13765 273 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 AHCYP23526 432 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 MSX1P28360 303 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 PTGS2P35354 604 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 NR4A2P43354 598 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 BLVRAP53004 296 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 CLDN20P56880 219 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 FOXF1Q12946 379 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 TRA2AQ13595 282 aaKnown RBP eCLIP17.22■□□□□ 0.352e-6■■■■■ 27.7
YBX3-201ENST00000228251 MFSD13AQ14CX5 517 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 PCOLCEQ15113 449 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 NTRK2Q16620 822 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 Q499Y3 187 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 NHLRC1Q6VVB1 395 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 GLCCI1Q86VQ1 547 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 WDFY1Q8IWB7 410 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 UBE2J2Q8N2K1 259 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 PRSS35Q8N3Z0 413 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 OR5AK2Q8NH90 309 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 ASB10Q8WXI3 467 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 FRMD6Q96NE9 622 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 OR8B4Q96RC9 309 aa17.22■□□□□ 0.35
YBX3-201ENST00000228251 THAP7Q9BT49 309 aaPredicted RBP17.22■□□□□ 0.35
YBX3-201ENST00000228251 EML6Q6ZMW3 1958 aa17.21■□□□□ 0.35
YBX3-201ENST00000228251 A0A1B0GTH9 108 aa17.21■□□□□ 0.35
YBX3-201ENST00000228251 A0A1B0GVC2 190 aa17.21■□□□□ 0.35
YBX3-201ENST00000228251 A6NIN4 97 aa17.21■□□□□ 0.35
YBX3-201ENST00000228251 IFITM5A6NNB3 132 aa17.21■□□□□ 0.35
YBX3-201ENST00000228251 AIPO00170 330 aa17.21■□□□□ 0.35
YBX3-201ENST00000228251 ZNF254O75437 659 aa17.21■□□□□ 0.35
YBX3-201ENST00000228251 UBL3O95164 117 aa17.21■□□□□ 0.35
YBX3-201ENST00000228251 IMPDH2P12268 514 aa17.21■□□□□ 0.35
YBX3-201ENST00000228251 DDOSTP39656 456 aa17.21■□□□□ 0.35
YBX3-201ENST00000228251 KIR3DL2P43630 455 aa17.21■□□□□ 0.35
YBX3-201ENST00000228251 ROM1Q03395 351 aa17.21■□□□□ 0.35
YBX3-201ENST00000228251 KCNJ8Q15842 424 aa17.21■□□□□ 0.35
YBX3-201ENST00000228251 HACD4Q5VWC8 232 aa17.21■□□□□ 0.35
YBX3-201ENST00000228251 FAM199XQ6PEV8 388 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms