RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 TUBAL3A6NHL2 446 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 ZNF780AO75290 641 aaPredicted RBP12.58□□□□□ -0.4
SIX4-201ENST00000216513 IGHV4-34P06331 123 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 CRHBPP24387 322 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 OPRL1P41146 370 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 FAM71E1Q6IPT2 247 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 NPSR1Q6W5P4 371 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 MEX3BQ6ZN04 569 aaKnown RBP12.58□□□□□ -0.4
SIX4-201ENST00000216513 CPPED1Q9BRF8 314 aaPredicted RBP12.58□□□□□ -0.4
SIX4-201ENST00000216513 TMEM74BQ9NUR3 256 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 WNK3Q9BYP7 1800 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 B4DXG7 233 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 GPNMBQ14956 572 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 TMEM244Q5VVB8 128 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 ESPNLQ6ZVH7 1005 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 STOML3Q8TAV4 291 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 SDSLQ96GA7 329 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 LSM5Q9Y4Y9 91 aaKnown RBP12.58□□□□□ -0.4
SIX4-201ENST00000216513 SGCEO43556 437 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 HPP00738 406 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 PPA1Q15181 289 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 NKG7Q16617 165 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 JMJD6Q6NYC1 403 aaPredicted RBP12.57□□□□□ -0.4
SIX4-201ENST00000216513 C16orf47Q6ZP98 133 aaPredicted RBP12.57□□□□□ -0.4
SIX4-201ENST00000216513 SPAG16Q8N0X2 631 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 TMEM255BQ8WV15 326 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 QDPRP09417 244 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 ARAFP10398 606 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 METAP1DQ6UB28 335 aaPredicted RBP12.57□□□□□ -0.4
SIX4-201ENST00000216513 SLC7A5P1Q8MH63 180 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 FNDC8Q8TC99 324 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 CHST11Q9NPF2 352 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 OR7C1O76099 320 aaPredicted RBP12.57□□□□□ -0.4
SIX4-201ENST00000216513 AMY2AP04746 511 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 HOXC4P09017 264 aaPredicted RBP12.57□□□□□ -0.4
SIX4-201ENST00000216513 MVKQ03426 396 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 LCN10Q6JVE6 187 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 LRFN3Q9BTN0 628 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 EIF5A2Q9GZV4 153 aaKnown RBP12.57□□□□□ -0.4
SIX4-201ENST00000216513 PPIL3Q9H2H8 161 aaKnown RBP12.57□□□□□ -0.4
SIX4-201ENST00000216513 SLC5A6Q9Y289 635 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 SPRY3O43610 288 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 RBBP9O75884 186 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 PIPP12273 146 aaPredicted RBP12.57□□□□□ -0.4
SIX4-201ENST00000216513 GM2AP17900 193 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 HCCSP53701 268 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 B4GALNT1Q00973 533 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 CDK5R2Q13319 367 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 C3AR1Q16581 482 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 CMIPQ8IY22 773 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 SLC43A2Q8N370 569 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 GPR148Q8TDV2 347 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 NMNAT3Q96T66 252 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 SGPP1Q9BX95 441 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 SYT4Q9H2B2 425 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 MOV10Q9HCE1 1003 aaKnown RBP12.57□□□□□ -0.4
SIX4-201ENST00000216513 STUB1Q9UNE7 303 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 ABCD4O14678 606 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 UCHL1P09936 223 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 HSF1Q00613 529 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 COQ5Q5HYK3 327 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 GPR157Q5UAW9 335 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 NLRC3Q7RTR2 1065 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 ACBD4Q8NC06 268 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 OR2Y1Q8NGV0 311 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 SCNM1Q9BWG6 230 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 ABCG5Q9H222 651 aa12.57□□□□□ -0.4
SIX4-201ENST00000216513 FRG2CA6NGY1 282 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 FKBP2P26885 142 aaKnown RBP12.56□□□□□ -0.4
SIX4-201ENST00000216513 USF2Q15853 346 aaPredicted RBP12.56□□□□□ -0.4
SIX4-201ENST00000216513 OR5H2Q8NGV7 314 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 NELFAQ9H3P2 528 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 EMC7Q9NPA0 242 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 TSPAN11A1L157 253 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 SSTR2P30874 369 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 ARR3P36575 388 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 RPL19P84098 196 aaKnown RBP12.56□□□□□ -0.4
SIX4-201ENST00000216513 CCBE1Q6UXH8 406 aaPredicted RBP12.56□□□□□ -0.4
SIX4-201ENST00000216513 MAVSQ7Z434 540 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 OR8J2Q8NGG1 315 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 RPL3LQ92901 407 aaKnown RBP12.56□□□□□ -0.4
SIX4-201ENST00000216513 SLC35A4Q96G79 324 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 FZR1Q9UM11 496 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 P2RX6O15547 441 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 ATG12O94817 140 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 SPDEFO95238 335 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 H2AFB2P0C5Z0 115 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 ARNTP27540 789 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 TRIM23P36406 574 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 MESP2Q0VG99 397 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 FOXF1Q12946 379 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 PCGF3Q3KNV8 242 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 RGS7BPQ6MZT1 257 aaPredicted RBP12.56□□□□□ -0.4
SIX4-201ENST00000216513 GNB4Q9HAV0 340 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 RASD1Q9Y272 281 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 POM121CA8CG34 1229 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 TOX3O15405 576 aaPredicted RBP12.56□□□□□ -0.4
SIX4-201ENST00000216513 CDC14BO60729 498 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 SELEP16581 610 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 MMP11P24347 488 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms