RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 CSNK1G2P78368 415 aa12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 CST9Q5W186 159 aa12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 GDPGP1Q6ZNW5 385 aa12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 TMPRSS7Q7RTY8 843 aa12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 TMEM179BQ7Z7N9 219 aa12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 RTN4RL1Q86UN2 441 aaPredicted RBP12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 TWSG1Q9GZX9 223 aa12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 PPA2Q9H2U2 334 aa12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 LANCL2Q9NS86 450 aa12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 CDK5RAP2Q96SN8 1893 aa12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 SLC22A23A1A5C7 686 aa12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 FOXE1O00358 373 aaPredicted RBP12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 CTNSO60931 367 aa12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 NFYAP23511 347 aaPredicted RBP12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 TSFMP43897 325 aaKnown RBP12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 ALKBH1Q13686 389 aaKnown RBP12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 ZMAT1Q5H9K5 638 aa12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 FOXB2Q5VYV0 432 aa12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 SLC46A3Q7Z3Q1 461 aa12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 YRDCQ86U90 279 aaKnown RBP12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 FAM71CQ8NEG0 241 aa12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 ARPC5LQ9BPX5 153 aa12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 SUSD2Q9UGT4 822 aa12.54□□□□□ -0.4
TGFBR3-201ENST00000212355 NPC1O15118 1278 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 LCMT2O60294 686 aaKnown RBP12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 PRAF2O60831 178 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 SLC43A1O75387 559 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 ATG12O94817 140 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 TEAD1P28347 426 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 NPBWR1P48145 328 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 BAMBIQ13145 260 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 ARHGAP11BQ3KRB8 267 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 OR6V1Q8N148 313 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 ADAMTS14Q8WXS8 1223 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 PATZ1Q9HBE1 687 aaKnown RBP12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 GLTPQ9NZD2 209 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 A0A1B0GUL6 1792 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 A0A1B0GTL3 188 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 TK1P04183 234 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 GUSBP08236 651 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 PPP3CBP16298 524 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 SUOXP51687 545 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 STEAP1BQ6NZ63 245 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 TPRA1Q86W33 373 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 SPIN2AQ99865 258 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 SPIN2BQ9BPZ2 258 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 A0A087WV62 115 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 CARD18P57730 90 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 PDLIM3Q53GG5 364 aaPredicted RBP12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 PRSS36Q5K4E3 855 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 ZFAND1Q8TCF1 268 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 PPP1R3CQ9UQK1 317 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 HCRTR1O43613 425 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 SNAPINO95295 136 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 TLE1Q04724 770 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 VWA2Q5GFL6 755 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 GLIPR1L1Q6UWM5 242 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 ZNF705AQ6ZN79 300 aaPredicted RBP12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 VASH1Q7L8A9 365 aaPredicted RBP12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 OR51H1Q8NH63 302 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 FCRL1Q96LA6 429 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 OR2M2Q96R28 347 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 NIPAL2Q9H841 368 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 MTCH1Q9NZJ7 389 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 CACNA1SQ13698 1873 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 A0A1W2PNR3 127 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 BTG2P78543 158 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 REEP5Q00765 189 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 HABP2Q14520 560 aaPredicted RBP12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 ACSM5Q6NUN0 579 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 RNF128Q8TEB7 428 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 HRASLS5Q96KN8 279 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 ISG20L2Q9H9L3 353 aaKnown RBP12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 TBC1D29Q9UFV1 150 aa12.53□□□□□ -0.4
TGFBR3-201ENST00000212355 H0YIV9 168 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 F11P03951 625 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 SPNP16150 400 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 KITLGP21583 273 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 GP2P55259 537 aaKnown RBP12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 TMEM182Q6ZP80 229 aaPredicted RBP12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 OR4Q3Q8NH05 313 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 UFSP2Q9NUQ7 469 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 GDE1Q9NZC3 331 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 GNG12Q9UBI6 72 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 LRRC37A3O60309 1634 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 A0A096LPE4 126 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 A0A1W2PPZ6 126 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 ATP6V1G2-DDX39BF2Z307 99 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 SNAPC5O75971 98 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 MT-CO2P00403 227 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 PIPP12273 146 aaPredicted RBP12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 SPINK2P20155 84 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 DGCR2P98153 550 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 TMEM71Q6P5X7 295 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 IL34Q6ZMJ4 242 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 ANGPTL5Q86XS5 388 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 OR51A4Q8NGJ6 313 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 OR51A2Q8NGJ7 313 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 GPR119Q8TDV5 335 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 SLCO4A1Q96BD0 722 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms