RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 P2RX6O15547 441 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 ZNF749O43361 778 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 CISD3P0C7P0 127 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 CAPZA1P52907 286 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 FAM53BQ14153 422 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 TMEM71Q6P5X7 295 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 TMEM205Q6UW68 189 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 NPEPL1Q8NDH3 523 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 TMEM52Q8NDY8 209 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 MYO9BQ13459 2157 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 TMEM200CA6NKL6 621 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 OR10H2O60403 315 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 FARS2O95363 451 aaKnown RBP18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 HLA-AP01891 365 aaKnown RBP18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 UBBP0CG47 229 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 UBCP0CG48 685 aaKnown RBP18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 MGMTP16455 207 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 RPS27AP62979 156 aaKnown RBP18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 UBA52P62987 128 aaKnown RBP18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 ALKBH1Q13686 389 aaKnown RBP18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 OR6N1Q8NGY5 312 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 HERVK_113Q902F9 699 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 ESRP2Q9H6T0 727 aaKnown RBP18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 XRCC3O43542 346 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 CALCBP10092 127 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 PVRP15151 417 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 RPA2P15927 270 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 CDKN2AP42771 156 aaKnown RBP18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 CAPZA2P47755 286 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 PABPC1L2AQ5JQF8 200 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 SLC35D2Q76EJ3 337 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 LDLRAD3Q86YD5 345 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 MFSD9Q8NBP5 474 aa18.3■□□□□ 0.52
PPP1R3F-201ENST00000055335 NUP210Q8TEM1 1887 aaPredicted RBP18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 A0A1W2PP55 124 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 ZNF254O75437 659 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 CTAG2O75638 210 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 CD34P28906 385 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 ATP1B3P54709 279 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 EIF2B5Q13144 721 aaKnown RBP18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 IRF4Q15306 451 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 CCDC157Q569K6 752 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 LRRTM1Q86UE6 522 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 CDRT4Q8N9R6 151 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 OR4S1Q8NGB4 309 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 PPP1R1CQ8WVI7 109 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 MRPS23Q9Y3D9 190 aaKnown RBP18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 CXorf51AA0A1B0GTR3 108 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 C1QTNF3-AMACRE9PGA6 284 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 ALOX12BO75342 701 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 TACSTD2P09758 323 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 CEBPBP17676 345 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 CALCRP30988 508 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 PBX2P40425 430 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 GALNT16Q8N428 558 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 OR52R1Q8NGF1 315 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 MYADMQ96S97 322 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 SERGEFQ9UGK8 458 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 STEAP1Q9UHE8 339 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 MRM2Q9UI43 246 aaKnown RBP18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 C19orf53Q9UNZ5 99 aaPredicted RBP18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 ASCC3Q8N3C0 2202 aaKnown RBP18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 MPDZO75970 2070 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 FITM1A5D6W6 292 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 DCTN6O00399 190 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 DCNP07585 359 aaKnown RBP18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 EPCAMP16422 314 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 SNTB1Q13884 538 aaKnown RBP18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 TRIM43Q96BQ3 446 aaPredicted RBP18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 ELF4Q99607 663 aaPredicted RBP18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 COMMD4Q9H0A8 199 aa18.29■□□□□ 0.52
PPP1R3F-201ENST00000055335 DCDC2BA2VCK2 349 aa18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 ZNF806P0C7X5 589 aa18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 SWI5Q1ZZU3 235 aa18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 C2orf76Q3KRA6 126 aa18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 ADAMTSL4Q6UY14 1074 aa18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 TMIEQ8NEW7 156 aa18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 GAL3ST3Q96A11 431 aa18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 C3orf49Q96BT1 292 aa18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 C14orf105Q9NVL8 296 aa18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 GPN3Q9UHW5 284 aaPredicted RBP18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 DAPP1Q9UN19 280 aa18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 AVPR2P30518 371 aa18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 SRSF3P84103 164 aaKnown RBP18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 H3F3CQ6NXT2 135 aa18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 GABRG1Q8N1C3 465 aa18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 CRB3Q9BUF7 120 aa18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 PHPT1Q9NRX4 125 aaPredicted RBP18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 SLC22A11Q9NSA0 550 aa18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 NOTCH4Q99466 2003 aa18.28■□□□□ 0.52
PPP1R3F-201ENST00000055335 IGSF11Q5DX21 431 aa18.27■□□□□ 0.52
PPP1R3F-201ENST00000055335 C3orf33Q6P1S2 294 aa18.27■□□□□ 0.52
PPP1R3F-201ENST00000055335 PSRC1Q6PGN9 363 aaPredicted RBP18.27■□□□□ 0.52
PPP1R3F-201ENST00000055335 LILRA6Q6PI73 481 aa18.27■□□□□ 0.52
PPP1R3F-201ENST00000055335 CCDC36Q8IYA8 594 aa18.27■□□□□ 0.52
PPP1R3F-201ENST00000055335 SPAG16Q8N0X2 631 aa18.27■□□□□ 0.52
PPP1R3F-201ENST00000055335 CCDC107Q8WV48 283 aa18.27■□□□□ 0.52
PPP1R3F-201ENST00000055335 CMTM3Q96MX0 182 aa18.27■□□□□ 0.52
PPP1R3F-201ENST00000055335 UQCC2Q9BRT2 126 aa18.27■□□□□ 0.52
PPP1R3F-201ENST00000055335 SRMSQ9H3Y6 488 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms