RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 POU4F2Q12837 409 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 SERTAD2Q14140 314 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.92□□□□□ -0.5
CTNS-201ENST00000046640 GPR139Q6DWJ6 353 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 ATG4DQ86TL0 474 aaPredicted RBP11.92□□□□□ -0.5
CTNS-201ENST00000046640 OR11G2Q8NGC1 345 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 TAAR8Q969N4 342 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 C12orf4Q9NQ89 552 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 MEIS3P1A6NDR6 274 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 LILRA5A6NI73 299 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 LMO7DNF2Z398 122 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 RAD1O60671 282 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 SRMP19623 302 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 DCTDP32321 178 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 ZNF117Q03924 483 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 RPL18Q07020 188 aaKnown RBP11.92□□□□□ -0.5
CTNS-201ENST00000046640 SFRP5Q5T4F7 317 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 TMEM65Q6PI78 240 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 NHLRC1Q6VVB1 395 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 OR56B4Q8NH76 319 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 OR14A16Q8NHC5 309 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 C1orf216Q8TAB5 229 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 ELMOD3Q96FG2 381 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 LCORQ96JN0 433 aaPredicted RBP11.92□□□□□ -0.5
CTNS-201ENST00000046640 ADAD1Q96M93 576 aaKnown RBP11.92□□□□□ -0.5
CTNS-201ENST00000046640 GAL3ST1Q99999 423 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 C12orf10Q9HB07 376 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 MMP25Q9NPA2 562 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 GRHPRQ9UBQ7 328 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 IKZF2Q9UKS7 526 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 CAMK2AQ9UQM7 478 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 NPFFR2Q9Y5X5 522 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 RPS10-NUDT3A0A1W2PQS6 291 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 H0YIG0 161 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 SMAD9O15198 467 aaKnown RBP11.91□□□□□ -0.5
CTNS-201ENST00000046640 NUPL2O15504 423 aaKnown RBP11.91□□□□□ -0.5
CTNS-201ENST00000046640 CDC40O60508 579 aaKnown RBP eCLIP11.91□□□□□ -0.5
CTNS-201ENST00000046640 PEX14O75381 377 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 ZFPL1O95159 310 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 UCHL1P09936 223 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 TMIGD3P0DMS9 266 aaPredicted RBP11.91□□□□□ -0.5
CTNS-201ENST00000046640 IL12BP29460 328 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 PPICP45877 212 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 HLA-DQA1Q5Y7H0 255 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 CMIPQ8IY22 773 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 MEIOBQ8N635 442 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 PMEPA1Q969W9 287 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 SYT4Q9H2B2 425 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 WDR76Q9H967 626 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 LIN7BQ9HAP6 207 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 RXFP3Q9NSD7 469 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 MRPL39Q9NYK5 338 aaKnown RBP11.91□□□□□ -0.5
CTNS-201ENST00000046640 CTSFQ9UBX1 484 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 SCP2D1Q9UJQ7 156 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 TEX51A0A1B0GUA7 166 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 PIN1P1O15428 100 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 ARL6IP5O75915 188 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 IL33O95760 270 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 DDAH2O95865 285 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 ACTA2P62736 377 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 ACTG2P63267 376 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 TRAM1Q15629 374 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 ARHGAP40Q5TG30 622 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 C9orf40Q8IXQ3 194 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 KDM8Q8N371 416 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 COQ8AQ8NI60 647 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 ZNF721Q8TF20 911 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 ZNF285Q96NJ3 590 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 ULBP3Q9BZM4 244 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 NUP50Q9UKX7 468 aa11.91□□□□□ -0.5
CTNS-201ENST00000046640 ATXN7L1Q9ULK2 861 aaPredicted RBP11.91□□□□□ -0.5
CTNS-201ENST00000046640 EML5Q05BV3 1969 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 IGHV1OR21-1A0A087WYE8 117 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 OGG1O15527 345 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 CSF2RBP32927 897 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 PRPS1P60891 318 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 HSD11B2P80365 405 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 LINC01590Q5TEZ4 76 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 LRRC69Q6ZNQ3 347 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 DPY19L4Q7Z388 723 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 SLC35F3Q8IY50 421 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 OR6V1Q8N148 313 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 ESX1Q8N693 406 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 POMGNT2Q8NAT1 580 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 OR6N2Q8NGY6 317 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 SYNPRQ8TBG9 265 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 THEM6Q8WUY1 208 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 SMIM4Q8WVI0 70 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 GFI1Q99684 422 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 NUDT22Q9BRQ3 303 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 B3GNT4Q9C0J1 378 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 NOX3Q9HBY0 568 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 ABRACLQ9P1F3 81 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 SLC6A5Q9Y345 797 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 A0A1W2PPL8 197 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 G3V3Q6 166 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 LGALS8O00214 317 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 PIAS2O75928 621 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 TSPAN9O75954 239 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 SERPINA3P01011 423 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms