RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	MDGA2	Q7Z553	956 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	SLC35F3	Q8IY50	421 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	PRSS35	Q8N3Z0	413 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	FAM71C	Q8NEG0	241 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	OR2T35	Q8NGX2	323 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	OR5AK2	Q8NH90	309 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	DLL4	Q9NR61	685 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	CA10	Q9NS85	328 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	LANCL2	Q9NS86	450 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	FOXJ3	Q9UPW0	622 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	FER1L5	A0AVI2	2057 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597		A0A1W2PPC4	97 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	C10orf142	B7Z368	130 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	SCD	O00767	359 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	SRPX2	O60687	465 aa	Predicted RBP	15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	KHDRBS3	O75525	346 aa	Known RBP	15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	NUDT14	O95848	222 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	CFD	P00746	253 aa	Predicted RBP	15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	SULT1A3	P0DMM9	295 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	SULT1A4	P0DMN0	295 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	ITPKB	P27987	946 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	CENPA	P49450	140 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	P2RX3	P56373	397 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	POU4F3	Q15319	338 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	LRRN1	Q6UXK5	716 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	BIVM	Q86UB2	503 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	KDM8	Q8N371	416 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	TCTN2	Q96GX1	697 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	GPR137	Q96N19	417 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	SYNDIG1	Q9H7V2	258 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	EMC7	Q9NPA0	242 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	PCDHGA5	Q9Y5G8	931 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	FKBP7	Q9Y680	259 aa		15.26	■□□□□ 0.03
PHGDH-223	ENST00000641597	WDFY4	Q6ZS81	3184 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	MUC3A	Q02505	3323 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	ZNF749	O43361	778 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	HRG	P04196	525 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	MEP1B	Q16820	701 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	LINC00303	Q3SY05	128 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	OR5M10	Q6IEU7	315 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	TEX261	Q6UWH6	196 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	MAMSTR	Q6ZN01	415 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	SLC16A9	Q7RTY1	509 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	ZNF680	Q8NEM1	530 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	OR52B4	Q8NGK2	314 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	TMEM106A	Q96A25	262 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	TCF7L1	Q9HCS4	588 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	EIF3K	Q9UBQ5	218 aa	Known RBP	15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	LAMP5	Q9UJQ1	280 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	GTF2A1L	Q9UNN4	478 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597		U3KQ87	197 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597		A0A1W2PQ72	361 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	CIB4	A0PJX0	185 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	LEUTX	A8MZ59	168 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	GSTZ1	O43708	216 aa	Predicted RBP	15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	UBE2M	P61081	183 aa	Known RBP	15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	GUCA2A	Q02747	115 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	DMWD	Q09019	674 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	ALKBH1	Q13686	389 aa	Known RBP	15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	SLC35D3	Q5M8T2	416 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	NLRC3	Q7RTR2	1065 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	CMIP	Q8IY22	773 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	OR4D10	Q8NGI6	311 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	OR56B4	Q8NH76	319 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	RPS4Y2	Q8TD47	263 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	GPX7	Q96SL4	187 aa	Predicted RBP	15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	NPAS1	Q99742	590 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	GPR27	Q9NS67	375 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	SLC22A13	Q9Y226	551 aa		15.25	■□□□□ 0.03
PHGDH-223	ENST00000641597	MEIKIN	A0A087WXM9	373 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	C2orf72	A6NCS6	295 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	TNFRSF10A	O00220	468 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	GPRIN2	O60269	458 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	PEX14	O75381	377 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	DNASE1	P24855	282 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	HSD17B7	P56937	341 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	OC90	Q02509	493 aa	Predicted RBP	15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	KIF26B	Q2KJY2	2108 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597		Q499Y3	187 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	LRRTM1	Q86UE6	522 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	NUDT9	Q9BW91	350 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	NOS1AP	O75052	506 aa	Predicted RBP	15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	KDM4B	O94953	1096 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	IFI6	P09912	130 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	PSMD4	P55036	377 aa	Known RBP	15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	SQSTM1	Q13501	440 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	FAM209A	Q5JX71	171 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	C1orf189	Q5VU69	101 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	CDC20B	Q86Y33	519 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	OR2G2	Q8NGZ5	317 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	NSMAF	Q92636	917 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	OR11A1	Q9GZK7	315 aa		15.24	■□□□□ 0.03
PHGDH-223	ENST00000641597	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	15.23	■□□□□ 0.03
PHGDH-223	ENST00000641597	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	15.23	■□□□□ 0.03
PHGDH-223	ENST00000641597	OR4C45	A6NMZ5	311 aa		15.23	■□□□□ 0.03
PHGDH-223	ENST00000641597	HLA-DQA2	P01906	255 aa		15.23	■□□□□ 0.03
PHGDH-223	ENST00000641597	PSMB1	P20618	241 aa	Known RBP	15.23	■□□□□ 0.03
PHGDH-223	ENST00000641597	NR0B1	P51843	470 aa	Known RBP	15.23	■□□□□ 0.03

Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms