RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	HKR1	P10072	659 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	CPN1	P15169	458 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	RPA2	P15927	270 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	TACR1	P25103	407 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	ACKR3	P25106	362 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	EPHA8	P29322	1005 aa	Predicted RBP	7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	SHC1	P29353	583 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	GJA4	P35212	333 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	MRPL19	P49406	292 aa	Known RBP	7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	PNLIPRP2	P54317	469 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	STXBP1	P61764	594 aa	Known RBP	7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	PPIA	P62937	165 aa	Known RBP	7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	TMEM115	Q12893	351 aa	Predicted RBP	7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	TSTA3	Q13630	321 aa	Predicted RBP	7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	CCDC85B	Q15834	202 aa	Predicted RBP	7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	ATP6AP1L	Q52LC2	224 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	C2orf27A	Q580R0	203 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	LYPLAL1	Q5VWZ2	237 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	NCR3LG1	Q68D85	454 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	WDR88	Q6ZMY6	472 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	C5orf24	Q7Z6I8	188 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	ZNF664	Q8N3J9	261 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	DTWD1	Q8N5C7	304 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	AGBL5	Q8NDL9	886 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	OR10AD1	Q8NGE0	317 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	RPLP0P6	Q8NHW5	317 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	GNPDA2	Q8TDQ7	276 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	THAP3	Q8WTV1	239 aa	Predicted RBP	7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	ASB11	Q8WXH4	323 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	GLYATL1	Q969I3	302 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	ARL11	Q969Q4	196 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	TIFA	Q96CG3	184 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	MVB12A	Q96EY5	273 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	ADGRG7	Q96K78	797 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	MRGPRX1	Q96LB2	322 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	INTS14	Q96SY0	518 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	LGR4	Q9BXB1	951 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	EBPL	Q9BY08	206 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	BHLHE41	Q9C0J9	482 aa	Predicted RBP	7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	UBQLN3	Q9H347	655 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	HHATL	Q9HCP6	504 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	DNAJC4	Q9NNZ3	241 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	PRSS16	Q9NQE7	514 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	NTM	Q9P121	344 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	ZNF282	Q9UDV7	671 aa	Predicted RBP	7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	OR52A1	Q9UKL2	312 aa		7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	CFAP20	Q9Y6A4	193 aa	Known RBP	7.3	□□□□□ -1.24
RTTN-223	ENST00000640931	KCNE1B	A0A087WTH5	132 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	OR5H15	A6NDH6	313 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	OR5H1	A6NKK0	313 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	ANHX	E9PGG2	379 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	RGS14	O43566	566 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	EIF4E2	O60573	245 aa	Known RBP	7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	PCCB	P05166	539 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	SFTPB	P07988	381 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	OR2T7	P0C7T2	308 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	GIMD1	P0DJR0	217 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	HLA-G	P17693	338 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	CPT2	P23786	658 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	HTR2C	P28335	458 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	AVPR2	P30518	371 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	NAA10	P41227	235 aa	Predicted RBP	7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	PXN	P49023	591 aa	Predicted RBP	7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	DAP	P51397	102 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	POLR2J	P52435	117 aa	Known RBP	7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	MTPN	P58546	118 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	PFN3	P60673	137 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	POLR2L	P62875	67 aa	Known RBP	7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	TRA2B	P62995	288 aa	Known RBP	7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	ST3GAL4	Q11206	333 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	JOSD1	Q15040	202 aa	Predicted RBP	7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	HNRNPA1L2	Q32P51	320 aa	Known RBP	7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	ZNF613	Q6PF04	617 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	TMEM91	Q6ZNR0	172 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	PARG	Q86W56	976 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	PTOV1	Q86YD1	416 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	C10orf111	Q8N326	155 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	CCDC107	Q8WV48	283 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	CDS1	Q92903	461 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	SMIM12	Q96EX1	92 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	APIP	Q96GX9	242 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	IL17F	Q96PD4	163 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	OR2M4	Q96R27	311 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	OR4K3	Q96R72	315 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	UBL7	Q96S82	380 aa	Predicted RBP	7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	MYOC	Q99972	504 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	VPS25	Q9BRG1	176 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	THAP7	Q9BT49	309 aa	Predicted RBP	7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	MRPL13	Q9BYD1	178 aa	Known RBP	7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	ACTR3C	Q9C0K3	210 aa	Predicted RBP	7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	MFF	Q9GZY8	342 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	IKZF5	Q9H5V7	419 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	SEC61A2	Q9H9S3	476 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	LPAR2	Q9HBW0	351 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	MBNL1	Q9NR56	388 aa	Known RBP	7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	UQCC1	Q9NVA1	299 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	FBXO34	Q9NWN3	711 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	NDUFB11	Q9NX14	153 aa		7.29	□□□□□ -1.24
RTTN-223	ENST00000640931	MGAT4C	Q9UBM8	478 aa		7.29	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms