RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 SWI5Q1ZZU3 235 aa21.91■■□□□ 1.1
VEGFA-232ENST00000640653 HTRA1Q92743 480 aa21.91■■□□□ 1.1
VEGFA-232ENST00000640653 RNF13O43567 381 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 PDE5AO76074 875 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 UMPSP11172 480 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 IFNGR1P15260 489 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 CALCRP30988 508 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 SERPINF1P36955 418 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 EFNA4P52798 201 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 NPRL3Q12980 569 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 ZNF813Q6ZN06 617 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 DEF8Q6ZN54 512 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 SLC35D2Q76EJ3 337 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 MDP1Q86V88 176 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 IL17RDQ8NFM7 739 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 OR2T12Q8NG77 320 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 OR10H5Q8NGA6 315 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 NANOS1Q8WY41 292 aaKnown RBP21.9■■□□□ 1.1
VEGFA-232ENST00000640653 PRSS27Q9BQR3 290 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 HEATR1Q9H583 2144 aaKnown RBP21.9■■□□□ 1.1
VEGFA-232ENST00000640653 SEC61A2Q9H9S3 476 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 TAS2R5Q9NYW4 299 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 AP3M1Q9Y2T2 418 aa21.9■■□□□ 1.1
VEGFA-232ENST00000640653 IGHV4-30-2A0A087WSY4 118 aa21.89■■□□□ 1.09
VEGFA-232ENST00000640653 VSTM5A8MXK1 200 aa21.89■■□□□ 1.09
VEGFA-232ENST00000640653 OR5F1O95221 314 aa21.89■■□□□ 1.09
VEGFA-232ENST00000640653 CELA3BP08861 270 aa21.89■■□□□ 1.09
VEGFA-232ENST00000640653 CSF3P09919 207 aa21.89■■□□□ 1.09
VEGFA-232ENST00000640653 TNFRSF1BP20333 461 aa21.89■■□□□ 1.09
VEGFA-232ENST00000640653 RBM34P42696 430 aaKnown RBP21.89■■□□□ 1.09
VEGFA-232ENST00000640653 KRTAP1-1Q07627 177 aa21.89■■□□□ 1.09
VEGFA-232ENST00000640653 MST1LQ2TV78 715 aa21.89■■□□□ 1.09
VEGFA-232ENST00000640653 VHLLQ6RSH7 139 aa21.89■■□□□ 1.09
VEGFA-232ENST00000640653 ZNF627Q7L945 461 aa21.89■■□□□ 1.09
VEGFA-232ENST00000640653 NUP37Q8NFH4 326 aa21.89■■□□□ 1.09
VEGFA-232ENST00000640653 OR6X1Q8NH79 312 aa21.89■■□□□ 1.09
VEGFA-232ENST00000640653 RP9Q8TA86 221 aaKnown RBP21.89■■□□□ 1.09
VEGFA-232ENST00000640653 ARMCX1Q9P291 453 aa21.89■■□□□ 1.09
VEGFA-232ENST00000640653 FKBP7Q9Y680 259 aa21.89■■□□□ 1.09
VEGFA-232ENST00000640653 PLCE1Q9P212 2302 aa21.88■■□□□ 1.09
VEGFA-232ENST00000640653 ZNF503-AS2A6NEH8 195 aa21.88■■□□□ 1.09
VEGFA-232ENST00000640653 B9A039 149 aa21.88■■□□□ 1.09
VEGFA-232ENST00000640653 ASAH2BP0C7U1 165 aa21.88■■□□□ 1.09
VEGFA-232ENST00000640653 CD79AP11912 226 aa21.88■■□□□ 1.09
VEGFA-232ENST00000640653 KDELR2P33947 212 aa21.88■■□□□ 1.09
VEGFA-232ENST00000640653 MDH1P40925 334 aaKnown RBP21.88■■□□□ 1.09
VEGFA-232ENST00000640653 ADIPOQQ15848 244 aa21.88■■□□□ 1.09
VEGFA-232ENST00000640653 LRRC23Q53EV4 343 aaPredicted RBP21.88■■□□□ 1.09
VEGFA-232ENST00000640653 NANOGNBQ7Z5D8 188 aa21.88■■□□□ 1.09
VEGFA-232ENST00000640653 ARPINQ7Z6K5 226 aa21.88■■□□□ 1.09
VEGFA-232ENST00000640653 WDFY1Q8IWB7 410 aa21.88■■□□□ 1.09
VEGFA-232ENST00000640653 LRRC17Q8N6Y2 441 aa21.88■■□□□ 1.09
VEGFA-232ENST00000640653 ZNF525Q8N782 197 aa21.88■■□□□ 1.09
VEGFA-232ENST00000640653 RCN3Q96D15 328 aa21.88■■□□□ 1.09
VEGFA-232ENST00000640653 FOXB1Q99853 325 aa21.88■■□□□ 1.09
VEGFA-232ENST00000640653 MEPEQ9NQ76 525 aaPredicted RBP21.88■■□□□ 1.09
VEGFA-232ENST00000640653 ELOVL7A1L3X0 281 aa21.87■■□□□ 1.09
VEGFA-232ENST00000640653 F12P00748 615 aaPredicted RBP21.87■■□□□ 1.09
VEGFA-232ENST00000640653 MT-ND1P03886 318 aa21.87■■□□□ 1.09
VEGFA-232ENST00000640653 OR4A8P0C604 315 aa21.87■■□□□ 1.09
VEGFA-232ENST00000640653 B4GALT1P15291 398 aa21.87■■□□□ 1.09
VEGFA-232ENST00000640653 SLC25A16P16260 332 aa21.87■■□□□ 1.09
VEGFA-232ENST00000640653 GSG1Q2KHT4 349 aa21.87■■□□□ 1.09
VEGFA-232ENST00000640653 CYBRD1Q53TN4 286 aa21.87■■□□□ 1.09
VEGFA-232ENST00000640653 SLC46A3Q7Z3Q1 461 aa21.87■■□□□ 1.09
VEGFA-232ENST00000640653 MYPOPQ86VE0 399 aaPredicted RBP21.87■■□□□ 1.09
VEGFA-232ENST00000640653 MICU2Q8IYU8 434 aa21.87■■□□□ 1.09
VEGFA-232ENST00000640653 POU5F2Q8N7G0 328 aa21.87■■□□□ 1.09
VEGFA-232ENST00000640653 FAM168AQ92567 244 aa21.87■■□□□ 1.09
VEGFA-232ENST00000640653 TMEM54Q969K7 222 aa21.87■■□□□ 1.09
VEGFA-232ENST00000640653 ZNF566Q969W8 418 aa21.87■■□□□ 1.09
VEGFA-232ENST00000640653 ZNF442Q9H7R0 627 aa21.87■■□□□ 1.09
VEGFA-232ENST00000640653 B3GNT2Q9NY97 397 aa21.87■■□□□ 1.09
VEGFA-232ENST00000640653 GLTPQ9NZD2 209 aa21.87■■□□□ 1.09
VEGFA-232ENST00000640653 RIMS3Q9UJD0 308 aa21.87■■□□□ 1.09
VEGFA-232ENST00000640653 FBXO9Q9UK97 447 aaPredicted RBP21.87■■□□□ 1.09
VEGFA-232ENST00000640653 NSD1Q96L73 2696 aaPredicted RBP21.87■■□□□ 1.09
VEGFA-232ENST00000640653 IGHV2OR16-5A0A0B4J2B6 119 aa21.86■■□□□ 1.09
VEGFA-232ENST00000640653 CCDC22O60826 627 aa21.86■■□□□ 1.09
VEGFA-232ENST00000640653 SHOX2O60902 331 aaPredicted RBP21.86■■□□□ 1.09
VEGFA-232ENST00000640653 HLA-HP01893 362 aa21.86■■□□□ 1.09
VEGFA-232ENST00000640653 THRBP10828 461 aa21.86■■□□□ 1.09
VEGFA-232ENST00000640653 OR1E2P47887 323 aa21.86■■□□□ 1.09
VEGFA-232ENST00000640653 HGFACQ04756 655 aa21.86■■□□□ 1.09
VEGFA-232ENST00000640653 PIN1Q13526 163 aaPredicted RBP21.86■■□□□ 1.09
VEGFA-232ENST00000640653 EFNB3Q15768 340 aa21.86■■□□□ 1.09
VEGFA-232ENST00000640653 NKAIN4Q8IVV8 208 aa21.86■■□□□ 1.09
VEGFA-232ENST00000640653 SLC25A44Q96H78 314 aaPredicted RBP21.86■■□□□ 1.09
VEGFA-232ENST00000640653 TPD52L3Q96J77 140 aa21.86■■□□□ 1.09
VEGFA-232ENST00000640653 DENND2DQ9H6A0 471 aaPredicted RBP21.86■■□□□ 1.09
VEGFA-232ENST00000640653 BLOC1S5-TXNDC5H3BN57 136 aa21.85■■□□□ 1.09
VEGFA-232ENST00000640653 CD5LO43866 347 aa21.85■■□□□ 1.09
VEGFA-232ENST00000640653 ENTPD5O75356 428 aa21.85■■□□□ 1.09
VEGFA-232ENST00000640653 BCL10O95999 233 aa21.85■■□□□ 1.09
VEGFA-232ENST00000640653 IGF2P01344 180 aa21.85■■□□□ 1.09
VEGFA-232ENST00000640653 UGT2B15P54855 530 aa21.85■■□□□ 1.09
VEGFA-232ENST00000640653 MELKQ14680 651 aa21.85■■□□□ 1.09
VEGFA-232ENST00000640653 PFN4Q8NHR9 129 aa21.85■■□□□ 1.09
VEGFA-232ENST00000640653 TMEM255BQ8WV15 326 aa21.85■■□□□ 1.09
VEGFA-232ENST00000640653 TMEM239Q8WW34 195 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms