RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 ANXA2P07355 339 aaKnown RBP18.67■□□□□ 0.58
PMS1-222ENST00000639501 AKAIN1P0CW23 69 aa18.67■□□□□ 0.58
PMS1-222ENST00000639501 RUNX2Q13950 521 aa18.67■□□□□ 0.58
PMS1-222ENST00000639501 DEFB134Q4QY38 66 aa18.67■□□□□ 0.58
PMS1-222ENST00000639501 LINC01590Q5TEZ4 76 aa18.67■□□□□ 0.58
PMS1-222ENST00000639501 TMED4Q7Z7H5 227 aa18.67■□□□□ 0.58
PMS1-222ENST00000639501 BEST3Q8N1M1 668 aa18.67■□□□□ 0.58
PMS1-222ENST00000639501 STEAP2Q8NFT2 490 aa18.67■□□□□ 0.58
PMS1-222ENST00000639501 STEAP1Q9UHE8 339 aa18.67■□□□□ 0.58
PMS1-222ENST00000639501 C19orf53Q9UNZ5 99 aaPredicted RBP18.67■□□□□ 0.58
PMS1-222ENST00000639501 INSL6Q9Y581 213 aa18.67■□□□□ 0.58
PMS1-222ENST00000639501 TRAV18A0A075B6X5 111 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 A0A1B0GW55 424 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 TMEM72A0PK05 275 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 RNF222A6NCQ9 220 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 CCSO14618 274 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 OR4E1P0C645 316 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 DUX4L2P0CJ85 424 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 DUX4L3P0CJ86 424 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 DUX4L4P0CJ87 422 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 DUX4L5P0CJ88 424 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 DUX4L6P0CJ89 424 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 DUX4L7P0CJ90 424 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 CPMP14384 443 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 BDKRB2P30411 391 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 CSF2RBP32927 897 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 ACAA2P42765 397 aaKnown RBP18.66■□□□□ 0.58
PMS1-222ENST00000639501 TSFMP43897 325 aaKnown RBP18.66■□□□□ 0.58
PMS1-222ENST00000639501 RAB13P51153 203 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 GPR85P60893 370 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 HNRNPA1L2Q32P51 320 aaKnown RBP18.66■□□□□ 0.58
PMS1-222ENST00000639501 ZNF528Q3MIS6 628 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 EXOSC6Q5RKV6 272 aaKnown RBP18.66■□□□□ 0.58
PMS1-222ENST00000639501 MANEAQ5SRI9 462 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 KCNRGQ8N5I3 272 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 MRI1Q9BV20 369 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 ZNF471Q9BX82 626 aaPredicted RBP18.66■□□□□ 0.58
PMS1-222ENST00000639501 SLITRK2Q9H156 845 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 DUX4Q9UBX2 424 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 ZMAT5Q9UDW3 170 aaKnown RBP18.66■□□□□ 0.58
PMS1-222ENST00000639501 MRM2Q9UI43 246 aaKnown RBP18.66■□□□□ 0.58
PMS1-222ENST00000639501 LRRC72A6NJI9 287 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 F8W036 122 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 F12P00748 615 aaPredicted RBP18.66■□□□□ 0.58
PMS1-222ENST00000639501 LIPNQ5VXI9 398 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 SLC6A19Q695T7 634 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 ZNF425Q6IV72 752 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 HAGHLQ6PII5 290 aaPredicted RBP18.66■□□□□ 0.58
PMS1-222ENST00000639501 C12orf45Q8N5I9 185 aaPredicted RBP18.66■□□□□ 0.58
PMS1-222ENST00000639501 CLEC1AQ8NC01 280 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 OR5AK2Q8NH90 309 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 VRK1Q99986 396 aaPredicted RBP18.66■□□□□ 0.58
PMS1-222ENST00000639501 UQCC2Q9BRT2 126 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 ULBP3Q9BZM4 244 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 NMNAT2Q9BZQ4 307 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 ZBP1Q9H171 429 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 C1orf198Q9H425 327 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.66■□□□□ 0.58
PMS1-222ENST00000639501 MAFFQ9ULX9 164 aa18.66■□□□□ 0.58
PMS1-222ENST00000639501 MYO7AQ13402 2215 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 OR5H14A6NHG9 310 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 BRINP1O60477 761 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 ITGB2P05107 769 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 VASPP50552 380 aaPredicted RBP18.65■□□□□ 0.58
PMS1-222ENST00000639501 FAM53BQ14153 422 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 NR0B2Q15466 257 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 ANKRD16Q6P6B7 361 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 OR1J2Q8NGS2 313 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 C15orf40Q8WUR7 153 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 ING5Q8WYH8 240 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 ASF1BQ9NVP2 202 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 TNFSF18Q9UNG2 199 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 CHD7Q9P2D1 2997 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 KANTRA0A1W2PQU2 76 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 FBXO45P0C2W1 286 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 CT62P0C5K7 136 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 GABRA3P34903 492 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 ALKBH1Q13686 389 aaKnown RBP18.65■□□□□ 0.58
PMS1-222ENST00000639501 ELAVL3Q14576 367 aaKnown RBP18.65■□□□□ 0.58
PMS1-222ENST00000639501 TCEA2Q15560 299 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 STEAP1BQ6NZ63 245 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 KIRREL2Q6UWL6 708 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 CAMKVQ8NCB2 501 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 SMARCD2Q92925 531 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 GAL3ST3Q96A11 431 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 CCDC74AQ96AQ1 378 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 PTDSS2Q9BVG9 487 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 CACNA1CQ13936 2221 aa18.65■□□□□ 0.58
PMS1-222ENST00000639501 A0A0D9SG52 128 aa18.64■□□□□ 0.57
PMS1-222ENST00000639501 TRBV5-5A0A0J9YX44 114 aa18.64■□□□□ 0.57
PMS1-222ENST00000639501 TMEM218A2RU14 115 aa18.64■□□□□ 0.57
PMS1-222ENST00000639501 M0QYG6 137 aa18.64■□□□□ 0.57
PMS1-222ENST00000639501 P2RX6O15547 441 aa18.64■□□□□ 0.57
PMS1-222ENST00000639501 BCL2L11O43521 198 aa18.64■□□□□ 0.57
PMS1-222ENST00000639501 RPS27P42677 84 aaKnown RBP18.64■□□□□ 0.57
PMS1-222ENST00000639501 SRSF3P84103 164 aaKnown RBP18.64■□□□□ 0.57
PMS1-222ENST00000639501 RAB11FIP2Q7L804 512 aa18.64■□□□□ 0.57
PMS1-222ENST00000639501 ZNF227Q86WZ6 799 aa18.64■□□□□ 0.57
PMS1-222ENST00000639501 TMEM52Q8NDY8 209 aa18.64■□□□□ 0.57
PMS1-222ENST00000639501 FANCFQ9NPI8 374 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms