RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 PRSS27Q9BQR3 290 aa12.04□□□□□ -0.48
PNKP-228ENST00000637325 CACNG6Q9BXT2 260 aa12.04□□□□□ -0.48
PNKP-228ENST00000637325 ULBP2Q9BZM5 246 aa12.04□□□□□ -0.48
PNKP-228ENST00000637325 BARX1Q9HBU1 254 aaPredicted RBP12.04□□□□□ -0.48
PNKP-228ENST00000637325 YLPM1P49750 1951 aaKnown RBP12.03□□□□□ -0.48
PNKP-228ENST00000637325 BLOC1S5-TXNDC5H3BN57 136 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 NDUFAB1O14561 156 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 SEC14L2O76054 403 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 RBM34P42696 430 aaKnown RBP12.03□□□□□ -0.48
PNKP-228ENST00000637325 NUDT2P50583 147 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 SLC7A2P52569 658 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 SEC24CP53992 1094 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 SELENOWP63302 87 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 TNK1Q13470 666 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 PIN1Q13526 163 aaPredicted RBP12.03□□□□□ -0.48
PNKP-228ENST00000637325 C3orf36Q3SXR2 165 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 ZNF813Q6ZN06 617 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 SLC35D2Q76EJ3 337 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 CPLX4Q7Z7G2 160 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 NKAIN4Q8IVV8 208 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 SLC15A3Q8IY34 581 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 LRRC17Q8N6Y2 441 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 TMEM239Q8WW34 195 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 CMTM5Q96DZ9 223 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 SGTBQ96EQ0 304 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 ZNF426Q9BUY5 554 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 KATNB1Q9BVA0 655 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 NELFAQ9H3P2 528 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 TAS2R5Q9NYW4 299 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 CRNNQ9UBG3 495 aaPredicted RBP12.03□□□□□ -0.48
PNKP-228ENST00000637325 GDF2Q9UK05 429 aaPredicted RBP12.03□□□□□ -0.48
PNKP-228ENST00000637325 PMF1-BGLAPU3KQ54 211 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 HIVEP2P31629 2446 aa12.03□□□□□ -0.48
PNKP-228ENST00000637325 CXCR6O00574 342 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 SSX4O60224 188 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 NDUFS7O75251 213 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 OR7A10O76100 309 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 ZNF682O95780 498 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 LY6G6DO95868 133 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 IGHV4-39P01824 125 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 MT-ND1P03886 318 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 HEXAP06865 529 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 CECR9P0C854 216 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 THRBP10828 461 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 CD79AP11912 226 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 CBR1P16152 277 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 FUT1P19526 365 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 ARR3P36575 388 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 ACVR1BP36896 505 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 IDH3GP51553 393 aaPredicted RBP12.02□□□□□ -0.49
PNKP-228ENST00000637325 NUDT6P53370 316 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 UGT2B15P54855 530 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 NAAAQ02083 359 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 ST3GAL3Q11203 375 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 NPRL3Q12980 569 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 RAB35Q15286 201 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 NHLRC1Q6VVB1 395 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 HACD2Q6Y1H2 254 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 TREML1Q86YW5 311 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 FAM169BQ8N8A8 192 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 OR6X1Q8NH79 312 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 PFN4Q8NHR9 129 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 TMEM255BQ8WV15 326 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 MEPEQ9NQ76 525 aaPredicted RBP12.02□□□□□ -0.49
PNKP-228ENST00000637325 GLTPQ9NZD2 209 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 GMPR2Q9P2T1 348 aaKnown RBP12.02□□□□□ -0.49
PNKP-228ENST00000637325 MED31Q9Y3C7 131 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 ZANQ9Y493 2812 aa12.02□□□□□ -0.49
PNKP-228ENST00000637325 A0A1W2PRG6 482 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 GMNCA6NCL1 334 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 VSTM5A8MXK1 200 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 MCIDASD6RGH6 385 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 BCL10O95999 233 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 IGLV1-44P01699 117 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 IFNW1P05000 195 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 ASAH2BP0C7U1 165 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 MELKQ14680 651 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 C11orf71Q6IPW1 123 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 VHLLQ6RSH7 139 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 FKBP9P1Q75LS8 142 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 SLC46A3Q7Z3Q1 461 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 MDP1Q86V88 176 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 OR4F15Q8NGB8 312 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 NANOS1Q8WY41 292 aaKnown RBP12.01□□□□□ -0.49
PNKP-228ENST00000637325 ZNF566Q969W8 418 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 FAM162AQ96A26 154 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 FBXO17Q96EF6 278 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 PRRC1Q96M27 445 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 KCTD14Q9BQ13 255 aaPredicted RBP12.01□□□□□ -0.49
PNKP-228ENST00000637325 RHNO1Q9BSD3 238 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 FNDC11Q9BVV2 318 aa12.01□□□□□ -0.49
PNKP-228ENST00000637325 NSD1Q96L73 2696 aaPredicted RBP12□□□□□ -0.49
PNKP-228ENST00000637325 RNF223E7ERA6 249 aa12□□□□□ -0.49
PNKP-228ENST00000637325 NME4O00746 187 aa12□□□□□ -0.49
PNKP-228ENST00000637325 IGKV3-15P01624 115 aa12□□□□□ -0.49
PNKP-228ENST00000637325 IGHG1P01857 330 aa12□□□□□ -0.49
PNKP-228ENST00000637325 HLA-HP01893 362 aa12□□□□□ -0.49
PNKP-228ENST00000637325 CELA3BP08861 270 aa12□□□□□ -0.49
PNKP-228ENST00000637325 B4GALT1P15291 398 aa12□□□□□ -0.49
PNKP-228ENST00000637325 LSP1P33241 339 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms