RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 BCL2L11O43521 198 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 RASGRP1O95267 797 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 MAS1P04201 325 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 OR4E1P0C645 316 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 SLC25A4P12235 298 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 GRPRP30550 384 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 EMDP50402 254 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 TAS2R19P59542 299 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 SRSF4Q08170 494 aaKnown RBP13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 EXOSC7Q15024 291 aaKnown RBP13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 PLPP4Q5VZY2 271 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 GLT8D1Q68CQ7 371 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 ELP2Q6IA86 826 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 LIN54Q6MZP7 749 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 ZAR1Q86SH2 424 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 CLEC1AQ8NC01 280 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 Q96M85 177 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 MNTQ99583 582 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 WSB2Q9NYS7 404 aaPredicted RBP13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 COMMD9Q9P000 198 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 MRM2Q9UI43 246 aaKnown RBP13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 SLC17A4Q9Y2C5 497 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 PLEKHM1Q9Y4G2 1056 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 TRAV18A0A075B6X5 111 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 TBC1D3IA0A087WXS9 549 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 OR6C74A6NCV1 312 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 ADAM11O75078 769 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 ATG12O94817 140 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 PAK4O96013 591 aaPredicted RBP13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 CEACAM5P06731 702 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 ACHEP22303 614 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 DRD3P35462 400 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 FBXO42Q6P3S6 717 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 LEG1Q6P5S2 330 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 KIRREL2Q6UWL6 708 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 JAZF1Q86VZ6 243 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 ZNF676Q8N7Q3 588 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 OR4E2Q8NGC2 313 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 DOK4Q8TEW6 326 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 ING5Q8WYH8 240 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 HOXB13Q92826 284 aaPredicted RBP13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 VWCEQ96DN2 955 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 NARS2Q96I59 477 aaKnown RBP13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 POFUT1Q9H488 388 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 TMEM185BQ9H7F4 350 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 IFT22Q9H7X7 185 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 MLXQ9UH92 298 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 A0A087WUJ7 227 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 TMEM82A0PJX8 343 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 TMEM72A0PK05 275 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 OR5H14A6NHG9 310 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 HSPB2A8KAH6 182 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 FGF17O60258 216 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 CD3DP04234 171 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 FNTBP49356 437 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 RPS4XP62701 263 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 ERVK-25P63136 954 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 S100A12P80511 92 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 GRM7Q14831 915 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 HSPB2Q16082 182 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 PAN3Q58A45 887 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 LY6G6FQ5SQ64 297 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 NKAIN2Q5VXU1 208 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 JMJD6Q6NYC1 403 aaPredicted RBP13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 ENPP7Q6UWV6 458 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 SVBPQ8N300 66 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 TMEM185AQ8NFB2 350 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 ZPLD1Q8TCW7 415 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 TMEM106AQ96A25 262 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 RASD2Q96D21 266 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 OR2A5Q96R48 311 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 UQCC2Q9BRT2 126 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 SLC19A3Q9BZV2 496 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 CHST6Q9GZX3 395 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 FKRPQ9H9S5 495 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 ACTR10Q9NZ32 417 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 TNFSF18Q9UNG2 199 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 MUC22E2RYF6 1773 aaPredicted RBP13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 GOLGA4Q13439 2230 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 TRAV8-7A0A075B6U6 113 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 OR14I1A6ND48 311 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 OR4C45A6NMZ5 311 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 EFCAB7A8K855 629 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 DISC1C4P0D8 188 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 ABHD16AO95870 558 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 WNT11O96014 354 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 APEHP13798 732 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 CEBPBP17676 345 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 RASGEF1BQ0VAM2 473 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 MGAT2Q10469 447 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 ZNHIT3Q15649 155 aaPredicted RBP13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 AGBL4Q5VU57 503 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 TMEM205Q6UW68 189 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 GABRG1Q8N1C3 465 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 TMEM229BQ8NBD8 167 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 STEAP2Q8NFT2 490 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 OR5M8Q8NGP6 311 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 GPX8Q8TED1 209 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 SMARCD2Q92925 531 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 CTHRC1Q96CG8 243 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms