RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 ZNF629Q9UEG4 869 aaPredicted RBP1.65□□□□□ -2.15
SRP54-214ENST00000630962 SHPKQ9UHJ6 478 aa1.65□□□□□ -2.15
SRP54-214ENST00000630962 WIF1Q9Y5W5 379 aa1.65□□□□□ -2.15
SRP54-214ENST00000630962 DDX49Q9Y6V7 483 aaKnown RBP1.65□□□□□ -2.15
SRP54-214ENST00000630962 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.64□□□□□ -2.15
SRP54-214ENST00000630962 IGLV1-50A0A075B6I6 118 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 IGHV5-10-1A0A0J9YXX1 117 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 A0A1B0GWJ7 208 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 OR5B21A6NL26 309 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 H0YHG0 523 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 RPL36A-HNRNPH2H7BZ11 118 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 TBX19O60806 448 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 ATP5LO75964 103 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 TM7SF2O76062 418 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 MPZL1O95297 269 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 OPN1MWP04001 364 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 TLX1NBP0CAT3 122 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 OPN1MW2P0DN77 364 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 OPN1MW3P0DN78 364 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 RORAP35398 523 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 HSD17B2P37059 387 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 CX3CR1P49238 355 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 FGF8P55075 233 aaPredicted RBP1.64□□□□□ -2.15
SRP54-214ENST00000630962 CBX1P83916 185 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 HTD2P86397 168 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 ACVR1Q04771 509 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 PDIA2Q13087 525 aaKnown RBP1.64□□□□□ -2.15
SRP54-214ENST00000630962 AQP6Q13520 282 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 GINS1Q14691 196 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 HES5Q5TA89 166 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 TMEM179Q6ZVK1 233 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 STRADAQ7RTN6 431 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 NUDCD3Q8IVD9 361 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 SLC38A6Q8IZM9 456 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 ZADH2Q8N4Q0 377 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 OR52P1PQ8NH57 321 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 LKAAEAR1Q8TD35 194 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 RLN3Q8WXF3 142 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 DOK1Q99704 481 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 THUMPD2Q9BTF0 503 aaKnown RBP1.64□□□□□ -2.15
SRP54-214ENST00000630962 LRRN3Q9H3W5 708 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 LY9Q9HBG7 655 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 AURKCQ9UQB9 309 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 CABIN1Q9Y6J0 2220 aa1.64□□□□□ -2.15
SRP54-214ENST00000630962 CENPJQ9HC77 1338 aaPredicted RBP1.64□□□□□ -2.15
SRP54-214ENST00000630962 IGKV3D-11A0A0A0MRZ8 115 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 IGHV3-74A0A0B4J1X5 117 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 TRAV39A0A0B4J263 110 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 PRKAB2O43741 272 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 SRP72O76094 671 aaKnown RBP1.63□□□□□ -2.15
SRP54-214ENST00000630962 DIRAS3O95661 229 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 IL4P05112 153 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 FGF1P05230 155 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 EPB41P11171 864 aaKnown RBP1.63□□□□□ -2.15
SRP54-214ENST00000630962 GPR6P46095 362 aaPredicted RBP1.63□□□□□ -2.15
SRP54-214ENST00000630962 CASP4P49662 377 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 CCR8P51685 355 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 SUB1P53999 127 aaKnown RBP eCLIP1.63□□□□□ -2.15
SRP54-214ENST00000630962 ESRRGP62508 458 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 CACNG7P62955 275 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 SLC7A9P82251 487 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 KLRB1Q12918 225 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 C1orf61Q13536 156 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 IRF4Q15306 451 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 PYHIN1Q6K0P9 492 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 C1orf94Q6P1W5 598 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 ANKFN1Q8N957 763 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 FAM133AQ8N9E0 248 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 SDR42E1Q8WUS8 393 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 OSTF1Q92882 214 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 OXGR1Q96P68 337 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 SULT4A1Q9BR01 284 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 RIBC2Q9H4K1 309 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 MCCC2Q9HCC0 563 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 SLCO1B3Q9NPD5 702 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 UFSP2Q9NUQ7 469 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 CGNQ9P2M7 1197 aaKnown RBP1.63□□□□□ -2.15
SRP54-214ENST00000630962 MMP17Q9ULZ9 603 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 BRWD3Q6RI45 1802 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 ATP8B3O60423 1300 aa1.63□□□□□ -2.15
SRP54-214ENST00000630962 PCM1Q15154 2024 aa1.62□□□□□ -2.15
SRP54-214ENST00000630962 TET2Q6N021 2002 aaPredicted RBP1.62□□□□□ -2.15
SRP54-214ENST00000630962 A0A1B0GVX0 72 aa1.62□□□□□ -2.15
SRP54-214ENST00000630962 TMEM223A0PJW6 202 aa1.62□□□□□ -2.15
SRP54-214ENST00000630962 GOLGA8SH3BPF8 625 aa1.62□□□□□ -2.15
SRP54-214ENST00000630962 IGKV1D-16P01601 117 aa1.62□□□□□ -2.15
SRP54-214ENST00000630962 CAPN1P07384 714 aa1.62□□□□□ -2.15
SRP54-214ENST00000630962 ADRA2AP08913 450 aa1.62□□□□□ -2.15
SRP54-214ENST00000630962 SLC2A5P22732 501 aa1.62□□□□□ -2.15
SRP54-214ENST00000630962 LAP3P28838 519 aa1.62□□□□□ -2.15
SRP54-214ENST00000630962 CA8P35219 290 aa1.62□□□□□ -2.15
SRP54-214ENST00000630962 QARSP47897 775 aaKnown RBP1.62□□□□□ -2.15
SRP54-214ENST00000630962 FILIP1LQ4L180 1135 aa1.62□□□□□ -2.15
SRP54-214ENST00000630962 TTC23Q5W5X9 447 aa1.62□□□□□ -2.15
SRP54-214ENST00000630962 ISLR2Q6UXK2 745 aa1.62□□□□□ -2.15
SRP54-214ENST00000630962 THOC6Q86W42 341 aaKnown RBP1.62□□□□□ -2.15
SRP54-214ENST00000630962 OR52H1Q8NGJ2 320 aa1.62□□□□□ -2.15
SRP54-214ENST00000630962 STMN2Q93045 179 aa1.62□□□□□ -2.15
SRP54-214ENST00000630962 RBM14Q96PK6 669 aaKnown RBP1.62□□□□□ -2.15
SRP54-214ENST00000630962 GABARAPL3Q9BY60 117 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms