RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 LAPTM4AQ15012 233 aa14.66□□□□□ -0.06
UBE3D-208ENST00000626828 CEACAM16Q2WEN9 425 aa14.66□□□□□ -0.06
UBE3D-208ENST00000626828 TBRG1Q3YBR2 411 aa14.66□□□□□ -0.06
UBE3D-208ENST00000626828 HIKESHIQ53FT3 197 aa14.66□□□□□ -0.06
UBE3D-208ENST00000626828 TSEN54Q7Z6J9 526 aaKnown RBP14.66□□□□□ -0.06
UBE3D-208ENST00000626828 CCDC36Q8IYA8 594 aa14.66□□□□□ -0.06
UBE3D-208ENST00000626828 DEPDC4Q8N2C3 294 aa14.66□□□□□ -0.06
UBE3D-208ENST00000626828 RBM15BQ8NDT2 890 aaKnown RBP14.66□□□□□ -0.06
UBE3D-208ENST00000626828 LILRB1Q8NHL6 650 aaPredicted RBP14.66□□□□□ -0.06
UBE3D-208ENST00000626828 ACOT11Q8WXI4 607 aaPredicted RBP14.66□□□□□ -0.06
UBE3D-208ENST00000626828 C7orf34Q96L11 122 aa14.66□□□□□ -0.06
UBE3D-208ENST00000626828 CXXC4Q9H2H0 198 aa14.66□□□□□ -0.06
UBE3D-208ENST00000626828 MOV10Q9HCE1 1003 aaKnown RBP14.66□□□□□ -0.06
UBE3D-208ENST00000626828 MAN2C1Q9NTJ4 1040 aa14.66□□□□□ -0.06
UBE3D-208ENST00000626828 NDUFAF4Q9P032 175 aa14.66□□□□□ -0.06
UBE3D-208ENST00000626828 MED13LQ71F56 2210 aa14.65□□□□□ -0.06
UBE3D-208ENST00000626828 F8P00451 2351 aa14.65□□□□□ -0.06
UBE3D-208ENST00000626828 A0A087WUU8 490 aa14.65□□□□□ -0.06
UBE3D-208ENST00000626828 A0A1W2PRG6 482 aa14.65□□□□□ -0.06
UBE3D-208ENST00000626828 M0R1B8 84 aa14.65□□□□□ -0.06
UBE3D-208ENST00000626828 ABCD4O14678 606 aa14.65□□□□□ -0.06
UBE3D-208ENST00000626828 TMCC2O75069 709 aa14.65□□□□□ -0.06
UBE3D-208ENST00000626828 TSPAN19P0C672 248 aa14.65□□□□□ -0.06
UBE3D-208ENST00000626828 CD40P25942 277 aa14.65□□□□□ -0.06
UBE3D-208ENST00000626828 AQP2P41181 271 aa14.65□□□□□ -0.06
UBE3D-208ENST00000626828 RPL18Q07020 188 aaKnown RBP14.65□□□□□ -0.06
UBE3D-208ENST00000626828 ANKDD1AQ495B1 522 aa14.65□□□□□ -0.06
UBE3D-208ENST00000626828 ZNF672Q499Z4 452 aaPredicted RBP14.65□□□□□ -0.06
UBE3D-208ENST00000626828 PHYHD1Q5SRE7 291 aa14.65□□□□□ -0.06
UBE3D-208ENST00000626828 ZNF730Q6ZMV8 503 aa14.65□□□□□ -0.06
UBE3D-208ENST00000626828 LURAP1LQ8IV03 231 aa14.65□□□□□ -0.06
UBE3D-208ENST00000626828 NRMQ8IXM6 262 aa14.65□□□□□ -0.06
UBE3D-208ENST00000626828 ZNF566Q969W8 418 aa14.65□□□□□ -0.06
UBE3D-208ENST00000626828 SLC25A44Q96H78 314 aaPredicted RBP14.65□□□□□ -0.06
UBE3D-208ENST00000626828 INIPQ9NRY2 104 aa14.65□□□□□ -0.06
UBE3D-208ENST00000626828 POFUT2Q9Y2G5 429 aa14.65□□□□□ -0.06
UBE3D-208ENST00000626828 A0A096LPE4 126 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 ARPC4-TTLL3A0A0A6YYG9 625 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 A0A1W2PPZ6 126 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 A0A1W2PRQ8 180 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 ZNF99A8MXY4 864 aaPredicted RBP14.64□□□□□ -0.07
UBE3D-208ENST00000626828 ARPC2O15144 300 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 F13BP05160 661 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 H1F0P07305 194 aaKnown RBP14.64□□□□□ -0.07
UBE3D-208ENST00000626828 FUT4P22083 530 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 CSNK1A1P48729 337 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 SMIM11AP58511 58 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 DGCR6Q14129 220 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 TBPL2Q6SJ96 375 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 RINLQ6ZS11 566 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 MBOAT2Q6ZWT7 520 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 TRPM8Q7Z2W7 1104 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 TMEM54Q969K7 222 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 FBXW5Q969U6 566 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 MCUR1Q96AQ8 359 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 ZNF837Q96EG3 531 aaPredicted RBP14.64□□□□□ -0.07
UBE3D-208ENST00000626828 CCL19Q99731 98 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 ULBP2Q9BZM5 246 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 C1orf21Q9H246 121 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 CISD1Q9NZ45 108 aaKnown RBP14.64□□□□□ -0.07
UBE3D-208ENST00000626828 GLTPQ9NZD2 209 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 ACTR3BQ9P1U1 418 aa14.64□□□□□ -0.07
UBE3D-208ENST00000626828 STX18Q9P2W9 335 aaKnown RBP14.64□□□□□ -0.07
UBE3D-208ENST00000626828 RAI1Q7Z5J4 1906 aaPredicted RBP14.64□□□□□ -0.07
UBE3D-208ENST00000626828 EFCAB9A8MZ26 197 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 CENPBD1B2RD01 187 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 SHISA9B4DS77 424 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 PIP5K1CO60331 668 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 SMPD2O60906 423 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 SAGP10523 405 aaPredicted RBP14.63□□□□□ -0.07
UBE3D-208ENST00000626828 MAKP20794 623 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 SLC9A3P48764 834 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 LSM11P83369 360 aaKnown RBP eCLIP14.63□□□□□ -0.07
UBE3D-208ENST00000626828 VLDLRP98155 873 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 TAF11Q15544 211 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 SLC22A25Q6T423 547 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 TMPRSS11FQ6ZWK6 438 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 HDDC2Q7Z4H3 204 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 OAFQ86UD1 273 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 PIAS4Q8N2W9 510 aaPredicted RBP14.63□□□□□ -0.07
UBE3D-208ENST00000626828 FAM86B1Q8N7N1 296 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 FAM169BQ8N8A8 192 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 SLC7A13Q8TCU3 470 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 SMAP2Q8WU79 429 aaPredicted RBP14.63□□□□□ -0.07
UBE3D-208ENST00000626828 TMEM171Q8WVE6 324 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 MUC13Q9H3R2 512 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 TAS2R1Q9NYW7 299 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 HIF3AQ9Y2N7 669 aa14.63□□□□□ -0.07
UBE3D-208ENST00000626828 NPIPB13A6NJU9 1138 aa14.62□□□□□ -0.07
UBE3D-208ENST00000626828 NPIPB4C9JG80 1138 aa14.62□□□□□ -0.07
UBE3D-208ENST00000626828 MCIDASD6RGH6 385 aa14.62□□□□□ -0.07
UBE3D-208ENST00000626828 hCG_2039718K7EN88 272 aa14.62□□□□□ -0.07
UBE3D-208ENST00000626828 IGHG1P01857 330 aa14.62□□□□□ -0.07
UBE3D-208ENST00000626828 CBR1P16152 277 aa14.62□□□□□ -0.07
UBE3D-208ENST00000626828 DAP3P51398 398 aaKnown RBP14.62□□□□□ -0.07
UBE3D-208ENST00000626828 TRIM25Q14258 630 aaKnown RBP14.62□□□□□ -0.07
UBE3D-208ENST00000626828 C3orf36Q3SXR2 165 aa14.62□□□□□ -0.07
UBE3D-208ENST00000626828 IQCCQ4KMZ1 466 aa14.62□□□□□ -0.07
UBE3D-208ENST00000626828 ALG10Q5BKT4 473 aa14.62□□□□□ -0.07
UBE3D-208ENST00000626828 PODNL1Q6PEZ8 512 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms