RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 KRT73Q86Y46 540 aa16.32■□□□□ 0.2
SMN1-211ENST00000625245 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.32■□□□□ 0.2
SMN1-211ENST00000625245 LRR1Q96L50 414 aa16.32■□□□□ 0.2
SMN1-211ENST00000625245 EPYCQ99645 322 aa16.32■□□□□ 0.2
SMN1-211ENST00000625245 SPATA5L1Q9BVQ7 753 aa16.32■□□□□ 0.2
SMN1-211ENST00000625245 ULBP2Q9BZM5 246 aa16.32■□□□□ 0.2
SMN1-211ENST00000625245 METTL17Q9H7H0 456 aaPredicted RBP16.32■□□□□ 0.2
SMN1-211ENST00000625245 TMEM27Q9HBJ8 222 aa16.32■□□□□ 0.2
SMN1-211ENST00000625245 LPAR2Q9HBW0 351 aa16.32■□□□□ 0.2
SMN1-211ENST00000625245 SLC13A4Q9UKG4 626 aa16.32■□□□□ 0.2
SMN1-211ENST00000625245 FZR1Q9UM11 496 aa16.32■□□□□ 0.2
SMN1-211ENST00000625245 CORINQ9Y5Q5 1042 aa16.32■□□□□ 0.2
SMN1-211ENST00000625245 RAB36O95755 333 aa16.31■□□□□ 0.2
SMN1-211ENST00000625245 BGLAPP02818 100 aa16.31■□□□□ 0.2
SMN1-211ENST00000625245 ARAFP10398 606 aa16.31■□□□□ 0.2
SMN1-211ENST00000625245 AHCYP23526 432 aa16.31■□□□□ 0.2
SMN1-211ENST00000625245 RGS8P57771 180 aaPredicted RBP16.31■□□□□ 0.2
SMN1-211ENST00000625245 RAB1AP62820 205 aa16.31■□□□□ 0.2
SMN1-211ENST00000625245 CDK6Q00534 326 aa16.31■□□□□ 0.2
SMN1-211ENST00000625245 MAD2L1BPQ15013 274 aaPredicted RBP16.31■□□□□ 0.2
SMN1-211ENST00000625245 FAM91A1Q658Y4 838 aa16.31■□□□□ 0.2
SMN1-211ENST00000625245 REEP3Q6NUK4 255 aa16.31■□□□□ 0.2
SMN1-211ENST00000625245 DHRS4L2Q6PKH6 230 aa16.31■□□□□ 0.2
SMN1-211ENST00000625245 SNX32Q86XE0 403 aa16.31■□□□□ 0.2
SMN1-211ENST00000625245 MEX3DQ86XN8 651 aaKnown RBP16.31■□□□□ 0.2
SMN1-211ENST00000625245 WDFY1Q8IWB7 410 aa16.31■□□□□ 0.2
SMN1-211ENST00000625245 SCAIQ8N9R8 606 aa16.31■□□□□ 0.2
SMN1-211ENST00000625245 CLDND2Q8NHS1 167 aa16.31■□□□□ 0.2
SMN1-211ENST00000625245 SLC41A3Q96GZ6 507 aa16.31■□□□□ 0.2
SMN1-211ENST00000625245 MOGAT1Q96PD6 335 aa16.31■□□□□ 0.2
SMN1-211ENST00000625245 NKIRAS1Q9NYS0 192 aa16.31■□□□□ 0.2
SMN1-211ENST00000625245 DUSP13Q9UII6 198 aa16.31■□□□□ 0.2
SMN1-211ENST00000625245 DYSFO75923 2080 aa16.3■□□□□ 0.2
SMN1-211ENST00000625245 LRRN3E7EW58 273 aa16.3■□□□□ 0.2
SMN1-211ENST00000625245 SAGP10523 405 aaPredicted RBP16.3■□□□□ 0.2
SMN1-211ENST00000625245 RPS23P62266 143 aaKnown RBP16.3■□□□□ 0.2
SMN1-211ENST00000625245 PUDPQ08623 228 aa16.3■□□□□ 0.2
SMN1-211ENST00000625245 RAB39AQ14964 217 aa16.3■□□□□ 0.2
SMN1-211ENST00000625245 OR1Q1Q15612 314 aa16.3■□□□□ 0.2
SMN1-211ENST00000625245 OR6S1Q8NH40 331 aa16.3■□□□□ 0.2
SMN1-211ENST00000625245 RDH5Q92781 318 aa16.3■□□□□ 0.2
SMN1-211ENST00000625245 ZNF75AQ96N20 296 aa16.3■□□□□ 0.2
SMN1-211ENST00000625245 FOXB1Q99853 325 aa16.3■□□□□ 0.2
SMN1-211ENST00000625245 HIF1ANQ9NWT6 349 aa16.3■□□□□ 0.2
SMN1-211ENST00000625245 MRPL39Q9NYK5 338 aaKnown RBP16.3■□□□□ 0.2
SMN1-211ENST00000625245 SLC25A37Q9NYZ2 338 aa16.3■□□□□ 0.2
SMN1-211ENST00000625245 TREM2Q9NZC2 230 aa16.3■□□□□ 0.2
SMN1-211ENST00000625245 SLAMF8Q9P0V8 285 aa16.3■□□□□ 0.2
SMN1-211ENST00000625245 MYEF2Q9P2K5 600 aaKnown RBP16.3■□□□□ 0.2
SMN1-211ENST00000625245 TESQ9UGI8 421 aaKnown RBP16.3■□□□□ 0.2
SMN1-211ENST00000625245 A0A1W2PPW3 197 aa16.29■□□□□ 0.2
SMN1-211ENST00000625245 FAM157AC9JC47 383 aa16.29■□□□□ 0.2
SMN1-211ENST00000625245 C11orf98E9PRG8 122 aa16.29■□□□□ 0.2
SMN1-211ENST00000625245 PPIHO43447 177 aaKnown RBP16.29■□□□□ 0.2
SMN1-211ENST00000625245 UBL3O95164 117 aa16.29■□□□□ 0.2
SMN1-211ENST00000625245 VENTXO95231 258 aa16.29■□□□□ 0.2
SMN1-211ENST00000625245 PATE4P0C8F1 98 aa16.29■□□□□ 0.2
SMN1-211ENST00000625245 NAT2P11245 290 aa16.29■□□□□ 0.2
SMN1-211ENST00000625245 ACHEP22303 614 aa16.29■□□□□ 0.2
SMN1-211ENST00000625245 LSP1P33241 339 aa16.29■□□□□ 0.2
SMN1-211ENST00000625245 CSNK1A1P48729 337 aa16.29■□□□□ 0.2
SMN1-211ENST00000625245 STX1BP61266 288 aa16.29■□□□□ 0.2
SMN1-211ENST00000625245 REP15Q6BDI9 236 aa16.29■□□□□ 0.2
SMN1-211ENST00000625245 C10orf111Q8N326 155 aa16.29■□□□□ 0.2
SMN1-211ENST00000625245 TMEM186Q96B77 213 aa16.29■□□□□ 0.2
SMN1-211ENST00000625245 ZNF224Q9NZL3 707 aa16.29■□□□□ 0.2
SMN1-211ENST00000625245 GRIP1Q9Y3R0 1128 aa16.29■□□□□ 0.2
SMN1-211ENST00000625245 A0A0B4J2E0 115 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 A0A1B0GX12 115 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 PLPP3O14495 311 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 WNT9BO14905 357 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 RGS9O75916 674 aaPredicted RBP16.28■□□□□ 0.2
SMN1-211ENST00000625245 OR6A2O95222 327 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 ADORA3P0DMS8 318 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 HOXB9P17482 250 aaPredicted RBP16.28■□□□□ 0.2
SMN1-211ENST00000625245 AQP1P29972 269 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 CDH12P55289 794 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 BIDP55957 195 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 RUNX1T1Q06455 604 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 SCARB2Q14108 478 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 ALKBH6Q3KRA9 238 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 SHQ1Q6PI26 577 aaKnown RBP16.28■□□□□ 0.2
SMN1-211ENST00000625245 NHLRC1Q6VVB1 395 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 THSD4Q6ZMP0 1018 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 ZNF627Q7L945 461 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 PXKQ7Z7A4 578 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 MSRB3Q8IXL7 192 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 YIPF5Q969M3 257 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 ZNF607Q96SK3 696 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 WFDC6Q9BQY6 131 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 DENND2DQ9H6A0 471 aaPredicted RBP16.28■□□□□ 0.2
SMN1-211ENST00000625245 ZNF275Q9NSD4 429 aaPredicted RBP16.28■□□□□ 0.2
SMN1-211ENST00000625245 USH1CQ9Y6N9 552 aa16.28■□□□□ 0.2
SMN1-211ENST00000625245 PRORSD1PA6NEY8 169 aa16.27■□□□□ 0.2
SMN1-211ENST00000625245 TPST2O60704 377 aa16.27■□□□□ 0.2
SMN1-211ENST00000625245 MSMBP08118 114 aa16.27■□□□□ 0.2
SMN1-211ENST00000625245 PPIBP23284 216 aaKnown RBP16.27■□□□□ 0.2
SMN1-211ENST00000625245 SLC6A2P23975 617 aa16.27■□□□□ 0.2
SMN1-211ENST00000625245 TMEM33P57088 247 aa16.27■□□□□ 0.2
SMN1-211ENST00000625245 MAGOHP61326 146 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms