RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 ASB12Q8WXK4 309 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 EMC6Q9BV81 110 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 NPAP1Q9NZP6 1156 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 ABI3Q9P2A4 366 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 HRKO00198 91 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 GOSR2O14653 212 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 POU2F2P09086 479 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 RAB40ALP0C0E4 278 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 PSMB1P20618 241 aaKnown RBP12.12□□□□□ -0.47
SIRPA-204ENST00000622179 VEGFCP49767 419 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 DUSP3P51452 185 aaPredicted RBP12.12□□□□□ -0.47
SIRPA-204ENST00000622179 ARPC4P59998 168 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 S100A10P60903 97 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 YIF1BQ5BJH7 314 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 C1orf140Q5VVS0 124 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 ZNF770Q6IQ21 691 aaPredicted RBP12.12□□□□□ -0.47
SIRPA-204ENST00000622179 BEST3Q8N1M1 668 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 RAB40AQ8WXH6 277 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 GCDHQ92947 438 aaPredicted RBP12.12□□□□□ -0.47
SIRPA-204ENST00000622179 ZNF764Q96H86 408 aaPredicted RBP12.12□□□□□ -0.47
SIRPA-204ENST00000622179 SNX18Q96RF0 628 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 MEPEQ9NQ76 525 aaPredicted RBP12.12□□□□□ -0.47
SIRPA-204ENST00000622179 MAN2C1Q9NTJ4 1040 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 VSX1Q9NZR4 365 aaPredicted RBP12.12□□□□□ -0.47
SIRPA-204ENST00000622179 CES1P1Q9UKY3 287 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 ZNF346Q9UL40 294 aaKnown RBP12.12□□□□□ -0.47
SIRPA-204ENST00000622179 CAMK2AQ9UQM7 478 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 AHCTF1Q8WYP5 2266 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 TMEM212A6NML5 194 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 E9PI62 339 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 RP2O75695 350 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 SLC22A5O76082 557 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 CBX7O95931 251 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 INHBBP09529 407 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 CDK5R1Q15078 307 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 NR0B2Q15466 257 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 ACBD4Q8NC06 268 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 OR56B4Q8NH76 319 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 HAVCR2Q8TDQ0 301 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 ZNF587Q96SQ5 575 aaPredicted RBP12.12□□□□□ -0.47
SIRPA-204ENST00000622179 HPF1Q9NWY4 346 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 SPEF1Q9Y4P9 236 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 RNF215Q9Y6U7 377 aa12.12□□□□□ -0.47
SIRPA-204ENST00000622179 TEX13DA0A0J9YY54 714 aaPredicted RBP12.11□□□□□ -0.47
SIRPA-204ENST00000622179 A8MVM7 634 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 SRFP11831 508 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 FCARP24071 287 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 UQCRC1P31930 480 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 IRF3Q14653 427 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 SLC35D3Q5M8T2 416 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 TSEN54Q7Z6J9 526 aaKnown RBP12.11□□□□□ -0.47
SIRPA-204ENST00000622179 ELMOD2Q8IZ81 293 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 SMIM19Q96E16 107 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 DERL3Q96Q80 235 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 MRI1Q9BV20 369 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 BARHL1Q9BZE3 327 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 SIT1Q9Y3P8 196 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 NAP1L6A6NFF2 107 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 EEF1E1-BLOC1S5C9J1V9 151 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 ERCC1P07992 297 aaPredicted RBP12.11□□□□□ -0.47
SIRPA-204ENST00000622179 ERGP11308 486 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 SDHBP21912 280 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 ZNF84P51523 738 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 FAPQ12884 760 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 CCDC58Q4VC31 144 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 ABCA11PQ4W5N1 156 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 LRRC69Q6ZNQ3 347 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 SPERTQ8NA61 448 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 FBLIM1Q8WUP2 373 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 HIST1H2AAQ96QV6 131 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 PSD2Q9BQI7 771 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 MED18Q9BUE0 208 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 COA3Q9Y2R0 106 aaPredicted RBP12.11□□□□□ -0.47
SIRPA-204ENST00000622179 SDHAP31040 664 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 FGF9P31371 208 aaPredicted RBP12.11□□□□□ -0.47
SIRPA-204ENST00000622179 CASRP41180 1078 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 POU3F4P49335 361 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 EEF1A1P68104 462 aaKnown RBP12.11□□□□□ -0.47
SIRPA-204ENST00000622179 ACKR1Q16570 336 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 YOD1Q5VVQ6 348 aaPredicted RBP12.11□□□□□ -0.47
SIRPA-204ENST00000622179 PLCZ1Q86YW0 608 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 OR5M1Q8NGP8 315 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 STT3BQ8TCJ2 826 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 ELP5Q8TE02 316 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 ZNF736B4DX44 427 aaPredicted RBP12.11□□□□□ -0.47
SIRPA-204ENST00000622179 PEX14O75381 377 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 GABRB1P18505 474 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 LSSP48449 732 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 BIDP55957 195 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 DCDP81605 110 aaKnown RBP12.11□□□□□ -0.47
SIRPA-204ENST00000622179 C17orf67Q0P5P2 114 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 TMEM244Q5VVB8 128 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 ZNF767PQ75MW2 155 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 C17orf47Q8NEP4 570 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 IL17RDQ8NFM7 739 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 OR14L1PQ8NHC6 308 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 C8orf44Q96CB5 159 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 OR2M2Q96R28 347 aa12.11□□□□□ -0.47
SIRPA-204ENST00000622179 URM1Q9BTM9 101 aaKnown RBP12.11□□□□□ -0.47
SIRPA-204ENST00000622179 DNAJB12Q9NXW2 375 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms