RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 TRAF3IP2O43734 574 aaPredicted RBP7.14□□□□□ -1.27
CPNE3-209ENST00000620393 AHCYL1O43865 530 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 WBP4O75554 376 aaKnown RBP7.14□□□□□ -1.27
CPNE3-209ENST00000620393 SERPINI2O75830 405 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 AQP8O94778 261 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 TGM6O95932 706 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 PLGP00747 810 aaPredicted RBP7.14□□□□□ -1.27
CPNE3-209ENST00000620393 EDN3P14138 238 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 GABRA1P14867 456 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 ZNF3P17036 446 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 ACVR2AP27037 513 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 PTGER4P35408 488 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 ACVR1BP36896 505 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 MLLT10P55197 1068 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 CLDN17P56750 224 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 CXCR4P61073 352 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 CSNK2BP67870 215 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 TEKQ02763 1124 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.14□□□□□ -1.27
CPNE3-209ENST00000620393 TOP3AQ13472 1001 aaPredicted RBP7.14□□□□□ -1.27
CPNE3-209ENST00000620393 RNPS1Q15287 305 aaKnown RBP7.14□□□□□ -1.27
CPNE3-209ENST00000620393 PRR30Q53SZ7 412 aaPredicted RBP7.14□□□□□ -1.27
CPNE3-209ENST00000620393 C6orf141Q5SZD1 244 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 LCE2AQ5TA79 106 aaPredicted RBP7.14□□□□□ -1.27
CPNE3-209ENST00000620393 AADACL4Q5VUY2 407 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 MEDAGQ5VYS4 303 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 FAM205BPQ63HN1 556 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 ABLIM2Q6H8Q1 611 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 LAIR2Q6ISS4 152 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 KRT80Q6KB66 452 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 GFRALQ6UXV0 394 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 CPOQ8IVL8 374 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 SLC37A3Q8NCC5 494 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 LSM14AQ8ND56 463 aaKnown RBP7.14□□□□□ -1.27
CPNE3-209ENST00000620393 OR6X1Q8NH79 312 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 ZNF519Q8TB69 540 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 FNDC9Q8TBE3 224 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 FAM57AQ8TBR7 257 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 RNF128Q8TEB7 428 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 APH1BQ8WW43 257 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 ASB10Q8WXI3 467 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 MED12Q93074 2177 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 RASD2Q96D21 266 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 SLC25A44Q96H78 314 aaPredicted RBP7.14□□□□□ -1.27
CPNE3-209ENST00000620393 ADAD1Q96M93 576 aaKnown RBP7.14□□□□□ -1.27
CPNE3-209ENST00000620393 Q96MT0 163 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 SNX18Q96RF0 628 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 NMNAT3Q96T66 252 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 YTHDF1Q9BYJ9 559 aaKnown RBP7.14□□□□□ -1.27
CPNE3-209ENST00000620393 GP6Q9HCN6 339 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 PNPLA3Q9NST1 481 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 CLN6Q9NWW5 311 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 MED29Q9NX70 200 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 H2AFY2Q9P0M6 372 aaPredicted RBP7.14□□□□□ -1.27
CPNE3-209ENST00000620393 KLHL9Q9P2J3 617 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 ZNF835Q9Y2P0 537 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 PCDHGB5Q9Y5G0 923 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 FLVCR1Q9Y5Y0 555 aa7.14□□□□□ -1.27
CPNE3-209ENST00000620393 SLC22A23A1A5C7 686 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 PRSS37A4D1T9 235 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 SH3D21A4FU49 640 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 SLC35F4A4IF30 521 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 OR6C68A6NDL8 312 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 CENPBD1B2RD01 187 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 KDM4EB2RXH2 506 aaPredicted RBP7.13□□□□□ -1.27
CPNE3-209ENST00000620393 PRR23D1E9PI22 279 aaPredicted RBP7.13□□□□□ -1.27
CPNE3-209ENST00000620393 M0R129 80 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 M0R3G1 203 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 GPR171O14626 319 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 WDR1O75083 606 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 ENTPD6O75354 484 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 TRMUO75648 421 aaKnown RBP7.13□□□□□ -1.27
CPNE3-209ENST00000620393 ZNF432O94892 652 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 RENP00797 406 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 TPOP07202 933 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 YES1P07947 543 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 PRR23D2P0DMB1 279 aaPredicted RBP7.13□□□□□ -1.27
CPNE3-209ENST00000620393 FCGR2AP12318 317 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 PAICSP22234 425 aaKnown RBP7.13□□□□□ -1.27
CPNE3-209ENST00000620393 NTF4P34130 210 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 SLC25A1P53007 311 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 BIDP55957 195 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 RUNX1T1Q06455 604 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 KRR1Q13601 381 aaKnown RBP7.13□□□□□ -1.27
CPNE3-209ENST00000620393 CRMP1Q14194 572 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 MESTQ5EB52 335 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 TMEM201Q5SNT2 666 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 EEF1A1P5Q5VTE0 462 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 NXNL2Q5VZ03 156 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 NSUN5P2Q63ZY6 315 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 ZNF585AQ6P3V2 769 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 PLBD1Q6P4A8 553 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 LEG1Q6P5S2 330 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 UGT2A3Q6UWM9 527 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 CXXC5Q7LFL8 322 aaKnown RBP7.13□□□□□ -1.27
CPNE3-209ENST00000620393 HDDC2Q7Z4H3 204 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 P4HA3Q7Z4N8 544 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 ADCK1Q86TW2 530 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 JAZF1Q86VZ6 243 aa7.13□□□□□ -1.27
CPNE3-209ENST00000620393 CYB561A3Q8NBI2 242 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms