RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 LINC01387J3KSC0 135 aa13.21□□□□□ -0.29
SHROOM1-208ENST00000617339 FOLR1P15328 257 aa13.21□□□□□ -0.29
SHROOM1-208ENST00000617339 AQP2P41181 271 aa13.21□□□□□ -0.29
SHROOM1-208ENST00000617339 C1QL3Q5VWW1 255 aa13.21□□□□□ -0.29
SHROOM1-208ENST00000617339 FAM198BQ6UWH4 519 aa13.21□□□□□ -0.29
SHROOM1-208ENST00000617339 ZPLD1Q8TCW7 415 aa13.21□□□□□ -0.29
SHROOM1-208ENST00000617339 SHARPINQ9H0F6 387 aa13.21□□□□□ -0.29
SHROOM1-208ENST00000617339 FXYD6Q9H0Q3 95 aa13.21□□□□□ -0.29
SHROOM1-208ENST00000617339 FAM74A7A6NL05 159 aa13.21□□□□□ -0.3
SHROOM1-208ENST00000617339 MCIDASD6RGH6 385 aa13.21□□□□□ -0.3
SHROOM1-208ENST00000617339 ARPC1BO15143 372 aaKnown RBP13.21□□□□□ -0.3
SHROOM1-208ENST00000617339 SLC25A12O75746 678 aa13.21□□□□□ -0.3
SHROOM1-208ENST00000617339 OR6A2O95222 327 aa13.21□□□□□ -0.3
SHROOM1-208ENST00000617339 AGR2O95994 175 aa13.21□□□□□ -0.3
SHROOM1-208ENST00000617339 SULT1A3P0DMM9 295 aa13.21□□□□□ -0.3
SHROOM1-208ENST00000617339 SULT1A4P0DMN0 295 aa13.21□□□□□ -0.3
SHROOM1-208ENST00000617339 HIST1H1CP16403 213 aaKnown RBP13.21□□□□□ -0.3
SHROOM1-208ENST00000617339 CAPZBP47756 277 aa13.21□□□□□ -0.3
SHROOM1-208ENST00000617339 CD226Q15762 336 aa13.21□□□□□ -0.3
SHROOM1-208ENST00000617339 FAM74A3Q4VXF1 159 aa13.21□□□□□ -0.3
SHROOM1-208ENST00000617339 BCORP1Q8N888 145 aa13.21□□□□□ -0.3
SHROOM1-208ENST00000617339 RELL2Q8NC24 303 aaPredicted RBP13.21□□□□□ -0.3
SHROOM1-208ENST00000617339 SARGQ9BW04 601 aa13.21□□□□□ -0.3
SHROOM1-208ENST00000617339 LYRM4Q9HD34 91 aa13.21□□□□□ -0.3
SHROOM1-208ENST00000617339 GNG8Q9UK08 70 aa13.21□□□□□ -0.3
SHROOM1-208ENST00000617339 MFSD2BA6NFX1 497 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 ELOA3DA6NLF2 546 aaPredicted RBP13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 ANXA2P2A6NMY6 339 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 RGS9O75916 674 aaPredicted RBP13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 PLAURQ03405 335 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 ELOA3BQ3SY89 546 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 SFXN4Q6P4A7 337 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 NHLRC1Q6VVB1 395 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 SERPINA12Q8IW75 414 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 ELOA3Q8NG57 546 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 ADAMTS14Q8WXS8 1223 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 MR1Q95460 341 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 TEAD3Q99594 435 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 DUSP22Q9NRW4 184 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 A0A087WV48 116 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 RNF13O43567 381 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 HMGN1P05114 100 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 FBLP22087 321 aaKnown RBP13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 ETFDHQ16134 617 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 HBMQ6B0K9 141 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 LINGO2Q7L985 606 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 SSX6Q7RTT6 188 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 MEIOBQ8N635 442 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 SNX33Q8WV41 574 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 PDCD1LG2Q9BQ51 273 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 ARL6Q9H0F7 186 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 SCPEP1Q9HB40 452 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 CA10Q9NS85 328 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 CUTCQ9NTM9 273 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 NCDNQ9UBB6 729 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 GPR160Q9UJ42 338 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 PLCL2Q9UPR0 1127 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 MUC22E2RYF6 1773 aaPredicted RBP13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 FRYQ5TBA9 3013 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 FAM221BA6H8Z2 402 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 ARRDC5A6NEK1 342 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 GMDSO60547 372 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 SPDEFO95238 335 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 UCHL1P09936 223 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 CT45A8P0DMV1 189 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 CT45A9P0DMV2 189 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 PTHLHP12272 177 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 UBE2MP61081 183 aaKnown RBP13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 CT45A2Q5DJT8 189 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 FHL5Q5TD97 284 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 MARCH3Q86UD3 253 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 SPEM1Q8N4L4 309 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 ZNRF4Q8WWF5 429 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 C20orf85Q9H1P6 137 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 FGF20Q9NP95 211 aaPredicted RBP13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 COPZ2Q9P299 210 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 RCE1Q9Y256 329 aa13.2□□□□□ -0.3
SHROOM1-208ENST00000617339 SMAD9O15198 467 aaKnown RBP13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 CTNSO60931 367 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 RCBTB2O95199 551 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 WISP1O95388 367 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 RAD52P43351 418 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 SOX2P48431 317 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 TOMM34Q15785 309 aaPredicted RBP13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 IGSF11Q5DX21 431 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 APOOLQ6UXV4 268 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 C17orf47Q8NEP4 570 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 ZNF671Q8TAW3 534 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 YIPF5Q969M3 257 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 Q96M85 177 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 NPAS1Q99742 590 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 GINS4Q9BRT9 223 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 ASB6Q9NWX5 421 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 ASPMQ8IZT6 3477 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 SELENOFO60613 162 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 HIST1H2ABP04908 130 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 NMBP08949 121 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 B2MP61769 119 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 AADACL4Q5VUY2 407 aa13.19□□□□□ -0.3
SHROOM1-208ENST00000617339 VASNQ6EMK4 673 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms