RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 IDH3AP50213 366 aa17.91■□□□□ 0.46
TRAPPC3-208ENST00000616074 CDH12P55289 794 aa17.91■□□□□ 0.46
TRAPPC3-208ENST00000616074 PIGFQ07326 219 aa17.91■□□□□ 0.46
TRAPPC3-208ENST00000616074 PUDPQ08623 228 aa17.91■□□□□ 0.46
TRAPPC3-208ENST00000616074 PMS2P3Q13401 168 aa17.91■□□□□ 0.46
TRAPPC3-208ENST00000616074 CAMK2DQ13557 499 aa17.91■□□□□ 0.46
TRAPPC3-208ENST00000616074 RIN1Q13671 783 aa17.91■□□□□ 0.46
TRAPPC3-208ENST00000616074 ZNF627Q7L945 461 aa17.91■□□□□ 0.46
TRAPPC3-208ENST00000616074 HPS1Q92902 700 aa17.91■□□□□ 0.46
TRAPPC3-208ENST00000616074 MRPL24Q96A35 216 aaKnown RBP17.91■□□□□ 0.46
TRAPPC3-208ENST00000616074 ZNF607Q96SK3 696 aa17.91■□□□□ 0.46
TRAPPC3-208ENST00000616074 MRPL37Q9BZE1 423 aaKnown RBP17.91■□□□□ 0.46
TRAPPC3-208ENST00000616074 B3GAT2Q9NPZ5 323 aa17.91■□□□□ 0.46
TRAPPC3-208ENST00000616074 MRPL39Q9NYK5 338 aaKnown RBP17.91■□□□□ 0.46
TRAPPC3-208ENST00000616074 ZNF224Q9NZL3 707 aa17.91■□□□□ 0.46
TRAPPC3-208ENST00000616074 POFUT2Q9Y2G5 429 aa17.91■□□□□ 0.46
TRAPPC3-208ENST00000616074 NOX1Q9Y5S8 564 aa17.91■□□□□ 0.46
TRAPPC3-208ENST00000616074 PRORSD1PA6NEY8 169 aa17.9■□□□□ 0.46
TRAPPC3-208ENST00000616074 SERPINI2O75830 405 aa17.9■□□□□ 0.46
TRAPPC3-208ENST00000616074 TGDSO95455 350 aa17.9■□□□□ 0.46
TRAPPC3-208ENST00000616074 ZNF35P13682 527 aa17.9■□□□□ 0.46
TRAPPC3-208ENST00000616074 IFNGR1P15260 489 aa17.9■□□□□ 0.46
TRAPPC3-208ENST00000616074 GPX2P18283 190 aa17.9■□□□□ 0.46
TRAPPC3-208ENST00000616074 SLC6A2P23975 617 aa17.9■□□□□ 0.46
TRAPPC3-208ENST00000616074 SQLEQ14534 574 aa17.9■□□□□ 0.46
TRAPPC3-208ENST00000616074 ARMC8Q8IUR7 673 aa17.9■□□□□ 0.46
TRAPPC3-208ENST00000616074 LINC01356Q8N9X3 169 aa17.9■□□□□ 0.46
TRAPPC3-208ENST00000616074 OR6N1Q8NGY5 312 aa17.9■□□□□ 0.46
TRAPPC3-208ENST00000616074 TMEM43Q9BTV4 400 aa17.9■□□□□ 0.46
TRAPPC3-208ENST00000616074 ULBP2Q9BZM5 246 aa17.9■□□□□ 0.46
TRAPPC3-208ENST00000616074 SLCO1B3Q9NPD5 702 aa17.9■□□□□ 0.46
TRAPPC3-208ENST00000616074 SLC13A4Q9UKG4 626 aa17.9■□□□□ 0.46
TRAPPC3-208ENST00000616074 NBEAL1Q6ZS30 2694 aa17.89■□□□□ 0.45
TRAPPC3-208ENST00000616074 PLPP3O14495 311 aa17.89■□□□□ 0.45
TRAPPC3-208ENST00000616074 AHCYP23526 432 aa17.89■□□□□ 0.45
TRAPPC3-208ENST00000616074 PTDSS1P48651 473 aaKnown RBP17.89■□□□□ 0.45
TRAPPC3-208ENST00000616074 RANBP3LQ86VV4 465 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC3-208ENST00000616074 C10orf53Q8N6V4 93 aa17.89■□□□□ 0.45
TRAPPC3-208ENST00000616074 HIPK4Q8NE63 616 aa17.89■□□□□ 0.45
TRAPPC3-208ENST00000616074 BHLHE22Q8NFJ8 381 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC3-208ENST00000616074 FOXB1Q99853 325 aa17.89■□□□□ 0.45
TRAPPC3-208ENST00000616074 CCDC28BQ9BUN5 200 aa17.89■□□□□ 0.45
TRAPPC3-208ENST00000616074 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC3-208ENST00000616074 CORO2BQ9UQ03 480 aa17.89■□□□□ 0.45
TRAPPC3-208ENST00000616074 ZNF726A6NNF4 738 aa17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 M0R233 179 aa17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 M0R3H8 397 aa17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 SYNGR3O43761 229 aa17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 SERPINB7O75635 380 aa17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 MFN2O95140 757 aa17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 GIPRP48546 466 aa17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 EVX1P49640 407 aa17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 CDH15P55291 814 aa17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 CCNIQ14094 377 aa17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 TRMT5Q32P41 509 aaKnown RBP17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 AGKQ53H12 422 aa17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 SWT1Q5T5J6 900 aaKnown RBP17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 PXKQ7Z7A4 578 aa17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 SMYD1Q8NB12 490 aa17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 SYT3Q9BQG1 590 aa17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 CPPED1Q9BRF8 314 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 REV1Q9UBZ9 1251 aa17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 TMEFF2Q9UIK5 374 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 ANGPT4Q9Y264 503 aa17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 SPEF1Q9Y4P9 236 aa17.88■□□□□ 0.45
TRAPPC3-208ENST00000616074 EVPLLA8MZ36 301 aa17.87■□□□□ 0.45
TRAPPC3-208ENST00000616074 C11orf98E9PRG8 122 aa17.87■□□□□ 0.45
TRAPPC3-208ENST00000616074 RAB36O95755 333 aa17.87■□□□□ 0.45
TRAPPC3-208ENST00000616074 GLRXP35754 106 aa17.87■□□□□ 0.45
TRAPPC3-208ENST00000616074 CSNK1A1P48729 337 aa17.87■□□□□ 0.45
TRAPPC3-208ENST00000616074 RAB1AP62820 205 aa17.87■□□□□ 0.45
TRAPPC3-208ENST00000616074 ELFN2Q5R3F8 820 aa17.87■□□□□ 0.45
TRAPPC3-208ENST00000616074 BEND6Q5SZJ8 279 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC3-208ENST00000616074 DLEU7Q6UYE1 221 aa17.87■□□□□ 0.45
TRAPPC3-208ENST00000616074 LINC00114Q6XXX2 140 aa17.87■□□□□ 0.45
TRAPPC3-208ENST00000616074 LRP11Q86VZ4 500 aa17.87■□□□□ 0.45
TRAPPC3-208ENST00000616074 SNX32Q86XE0 403 aa17.87■□□□□ 0.45
TRAPPC3-208ENST00000616074 OR5J2Q8NH18 312 aa17.87■□□□□ 0.45
TRAPPC3-208ENST00000616074 LRRC8CQ8TDW0 803 aa17.87■□□□□ 0.45
TRAPPC3-208ENST00000616074 C1orf159Q96HA4 380 aa17.87■□□□□ 0.45
TRAPPC3-208ENST00000616074 MCHR1Q99705 422 aa17.87■□□□□ 0.45
TRAPPC3-208ENST00000616074 EVA1AQ9H8M9 152 aa17.87■□□□□ 0.45
TRAPPC3-208ENST00000616074 UBL3O95164 117 aa17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 MT-ATP6P00846 226 aa17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 OPN1SWP03999 348 aa17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 ADORA3P0DMS8 318 aa17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 TCN1P20061 433 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 ALDH3B1P43353 468 aa17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 SEC24CP53992 1094 aa17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 BIDP55957 195 aa17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 PCBP3P57721 371 aaKnown RBP17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 RAB39AQ14964 217 aa17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 NPTX1Q15818 432 aa17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 FXNQ16595 210 aa17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 GKAP1Q5VSY0 366 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 LIPNQ5VXI9 398 aa17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 WDR88Q6ZMY6 472 aa17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 PTOV1Q86YD1 416 aa17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 FGFBP3Q8TAT2 258 aa17.86■□□□□ 0.45
TRAPPC3-208ENST00000616074 ARHGDIGQ99819 225 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms