RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 ARHGAP40Q5TG30 622 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 PRAMEF17Q5VTA0 474 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 HSD17B13Q7Z5P4 300 aaPredicted RBP12.04□□□□□ -0.48
MSH6-214ENST00000616033 TMEM17Q86X19 198 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 TCEAL8Q8IYN2 117 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 PLPP7Q8NBV4 271 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 TMEM106AQ96A25 262 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 PELI2Q9HAT8 420 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 FAM96BQ9Y3D0 163 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 ZNF337Q9Y3M9 751 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 ZNF106Q9H2Y7 1883 aaKnown RBP12.04□□□□□ -0.48
MSH6-214ENST00000616033 TRAV1-2A0A0B4J238 106 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 A0A1B0GW55 424 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 A0A1B0GWA3 101 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 PRR32B1ATL7 298 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 DUX4L2P0CJ85 424 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 DUX4L3P0CJ86 424 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 DUX4L4P0CJ87 422 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 DUX4L5P0CJ88 424 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 DUX4L6P0CJ89 424 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 DUX4L7P0CJ90 424 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 ADRB3P13945 408 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 BDKRB2P30411 391 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 SLC6A6P31641 620 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 DLSTP36957 453 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 PTGFRP43088 359 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 SKP2Q13309 424 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 DCST2Q5T1A1 773 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 LEG1Q6P5S2 330 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 TMEM205Q6UW68 189 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 OR2W3Q7Z3T1 314 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 LDLRAD3Q86YD5 345 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 LRRC25Q8N386 305 aaPredicted RBP12.04□□□□□ -0.48
MSH6-214ENST00000616033 OR10R2Q8NGX6 335 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 C19orf43Q9BQ61 176 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 STARD5Q9NSY2 213 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 DUX4Q9UBX2 424 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 OR14I1A6ND48 311 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 NAP1L6A6NFF2 107 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 SULT1B1O43704 296 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 PAPLNO95428 1278 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 TXNDC12O95881 172 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 OLFM2O95897 454 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 NGFRP08138 427 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 ADRA2CP18825 462 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 PPP2CBP62714 309 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 PPP2CAP67775 309 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 ACTC1P68032 377 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 ACTA1P68133 377 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 CSRP2Q16527 193 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 KLHL26Q53HC5 615 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 H3F3CQ6NXT2 135 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 RPL22L1Q6P5R6 122 aaKnown RBP12.03□□□□□ -0.48
MSH6-214ENST00000616033 KRT77Q7Z794 578 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 KREMEN2Q8NCW0 462 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 OR2L5Q8NG80 312 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 OR4N2Q8NGD1 307 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 OR5T3Q8NGG3 340 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 OR1J2Q8NGS2 313 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 OR6N2Q8NGY6 317 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 PAPOLGQ9BWT3 736 aaKnown RBP12.03□□□□□ -0.48
MSH6-214ENST00000616033 ZNF281Q9Y2X9 895 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 TBC1D3EA0A087X179 549 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 FITM1A5D6W6 292 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 GSTZ1O43708 216 aaPredicted RBP12.03□□□□□ -0.48
MSH6-214ENST00000616033 CLEC3AO75596 197 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 HTR3BO95264 441 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 GALP22466 123 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 CCKBRP32239 447 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 EPHA4P54764 986 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 PSMD4P55036 377 aaKnown RBP12.03□□□□□ -0.48
MSH6-214ENST00000616033 SLC7A9P82251 487 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 MLF2Q15773 248 aaPredicted RBP12.03□□□□□ -0.48
MSH6-214ENST00000616033 LIPNQ5VXI9 398 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 SLC39A5Q6ZMH5 540 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 LRRC69Q6ZNQ3 347 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 RAB11FIP2Q7L804 512 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 OR4S1Q8NGB4 309 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 LMLNQ96KR4 655 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 MS4A4EQ96PG1 132 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 SLC19A3Q9BZV2 496 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 PRSS16Q9NQE7 514 aa12.03□□□□□ -0.48
MSH6-214ENST00000616033 MBNL1Q9NR56 388 aaKnown RBP12.03□□□□□ -0.48
MSH6-214ENST00000616033 MTCL1Q9Y4B5 1905 aaKnown RBP12.03□□□□□ -0.48
MSH6-214ENST00000616033 TBC1D3DA0A087WVF3 549 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 TBC1D3IA0A087WXS9 549 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 TBC1D3KA0A087X1G2 549 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 TBC1D3BA6NDS4 549 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 C5orf51A6NDU8 294 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 TBC1D3FA6NER0 549 aaPredicted RBP12.02□□□□□ -0.48
MSH6-214ENST00000616033 OR5H14A6NHG9 310 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 OR6C76A6NM76 312 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 TBC1D3LB9A6J9 549 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 PRRT4C9JH25 899 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 TBC1D3HP0C7X1 549 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 AVPR2P30518 371 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 PPT1P50897 306 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 HTRA4P83105 476 aaPredicted RBP12.02□□□□□ -0.48
MSH6-214ENST00000616033 UBXN2BQ14CS0 331 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 OLFML2AQ68BL7 652 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms