RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 RBM34P42696 430 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 SSR4P51571 173 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 GDPD3Q7L5L3 318 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 OR1L3Q8NH93 324 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 TMEM106AQ96A25 262 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 NUDT9Q9BW91 350 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 PLEK2Q9NYT0 353 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 KCNS2Q9ULS6 477 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 RHBDD3Q9Y3P4 386 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 IGHV1OR15-9A0A0B4J2B8 117 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 CENPVL1A0A0U1RR11 272 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 TMEM129A0AVI4 362 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 GGT3PA6NGU5 568 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 SSX4O60224 188 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 IL9P15248 144 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 P2RX1P51575 399 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 CDK5Q00535 292 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 SLC22A6Q4U2R8 563 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 SLC16A9Q7RTY1 509 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 CMIPQ8IY22 773 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 BEST3Q8N1M1 668 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 ZNF565Q8N9K5 539 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 GPBAR1Q8TDU6 330 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 CCNL2Q96S94 520 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 ARHGAP9Q9BRR9 750 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 RDH8Q9NYR8 311 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 TAS2R4Q9NYW5 299 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 SLC7A11Q9UPY5 501 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 PRAMEF25A6NGN4 478 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 IDSB3KWA1 339 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 GSTT2P0CG29 244 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 EDN3P14138 238 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 PCBP3P57721 371 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 CSNK2A1P68400 391 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 FGFBP1Q14512 234 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 GPR139Q6DWJ6 353 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 TPRA1Q86W33 373 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 GLB1L2Q8IW92 636 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 TMEM52Q8NDY8 209 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 CSNK2A3Q8NEV1 391 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 OR8D4Q8NGM9 314 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 KIAA1143Q96AT1 154 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 MSANTD3Q96H12 275 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 FBXL4Q9UKA2 621 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 NOX1Q9Y5S8 564 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 A6NCN8 305 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 M0QYG6 137 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 CDC42EP2O14613 210 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 ARPC5O15511 151 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 TPD52L2O43399 206 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 OR2T1O43869 369 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 SPDEFO95238 335 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 ELAVL1Q15717 326 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 YOD1Q5VVQ6 348 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 ZNF704Q6ZNC4 412 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 DGAT2L6Q6ZPD8 337 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 ACTR6Q9GZN1 396 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 ARL6Q9H0F7 186 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 FBXO8Q9NRD0 319 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 MAB21L2Q9Y586 359 aa8.16□□□□□ -1.1
PDLIM5-222ENST00000615540 OR2J2O76002 312 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 IGHV3-9P01782 118 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 DGCR2P98153 550 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 Q499Y3 187 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 DCAF12Q5T6F0 453 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 OR5H2Q8NGV7 314 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 THRSPQ92748 146 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 FGGYQ96C11 551 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 DHRS1Q96LJ7 313 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 WWTR1Q9GZV5 400 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 ZNF442Q9H7R0 627 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 MEPEQ9NQ76 525 aaPredicted RBP8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 DNAJB12Q9NXW2 375 aaKnown RBP8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 MOKQ9UQ07 419 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 NPFFR2Q9Y5X5 522 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 GJE1A6NN92 205 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 F5H5P2 479 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 RAB3DO95716 219 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 IGHA2P01877 340 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 PTPN6P29350 595 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 C21orf58P58505 322 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 HERV-K104P61576 105 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 BEX5Q5H9J7 111 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 ABHD17BQ5VST6 288 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 FAM199XQ6PEV8 388 aaPredicted RBP8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 LINC00696Q6ZRV3 163 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 SLC22A18ASQ8N1D0 253 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 ASB17Q8WXJ9 295 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 SPTSSAQ969W0 71 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 SLC5A7Q9GZV3 580 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 SLC6A15Q9H2J7 730 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 GREB1Q4ZG55 1949 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 A0A0A6YYH2 397 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 A6NJ64 397 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 TMEM212A6NML5 194 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 METTL12A8MUP2 240 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 CD14P08571 375 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 CSF1P09603 554 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 GPR85P60893 370 aa8.15□□□□□ -1.1
PDLIM5-222ENST00000615540 GUSBP11Q6P575 273 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms