RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 PRTGQ2VWP7 1150 aa11.95□□□□□ -0.5
FOXN3-219ENST00000615335 C1orf94Q6P1W5 598 aa11.95□□□□□ -0.5
FOXN3-219ENST00000615335 LYPD4Q6UWN0 246 aa11.95□□□□□ -0.5
FOXN3-219ENST00000615335 PRSS41Q7RTY9 318 aa11.95□□□□□ -0.5
FOXN3-219ENST00000615335 HMGN2P46Q86SG4 172 aa11.95□□□□□ -0.5
FOXN3-219ENST00000615335 PUSL1Q8N0Z8 303 aaKnown RBP11.95□□□□□ -0.5
FOXN3-219ENST00000615335 MORN4Q8NDC4 146 aa11.95□□□□□ -0.5
FOXN3-219ENST00000615335 OR6T1Q8NGN1 323 aa11.95□□□□□ -0.5
FOXN3-219ENST00000615335 OR1L3Q8NH93 324 aa11.95□□□□□ -0.5
FOXN3-219ENST00000615335 RNASE11Q8TAA1 199 aaKnown RBP11.95□□□□□ -0.5
FOXN3-219ENST00000615335 PHOSPHO1Q8TCT1 267 aa11.95□□□□□ -0.5
FOXN3-219ENST00000615335 NR4A3Q92570 626 aa11.95□□□□□ -0.5
FOXN3-219ENST00000615335 SMIM10Q96HG1 83 aa11.95□□□□□ -0.5
FOXN3-219ENST00000615335 PRRC1Q96M27 445 aa11.95□□□□□ -0.5
FOXN3-219ENST00000615335 OR6C1Q96RD1 312 aa11.95□□□□□ -0.5
FOXN3-219ENST00000615335 FBXW2Q9UKT8 454 aa11.95□□□□□ -0.5
FOXN3-219ENST00000615335 PLEKHA6Q9Y2H5 1048 aa11.95□□□□□ -0.5
FOXN3-219ENST00000615335 SEC16AO15027 2179 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 ZNF593O00488 134 aaPredicted RBP11.94□□□□□ -0.5
FOXN3-219ENST00000615335 B3GALT2O43825 422 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 GSTM3P21266 225 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 NTSP30990 170 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 BUD31P41223 144 aaPredicted RBP11.94□□□□□ -0.5
FOXN3-219ENST00000615335 ANXA11P50995 505 aaKnown RBP11.94□□□□□ -0.5
FOXN3-219ENST00000615335 E2F1Q01094 437 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 NHLH1Q02575 133 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 ACY1Q03154 408 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 ZSWIM7Q19AV6 140 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 C4orf46Q504U0 113 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 ENTPD8Q5MY95 495 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 PRICKLE2Q7Z3G6 844 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 PIP4P1Q86T03 277 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 ZNF501Q96CX3 271 aaPredicted RBP11.94□□□□□ -0.5
FOXN3-219ENST00000615335 SERINC2Q96SA4 455 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 GPA33Q99795 319 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 FAIM2Q9BWQ8 316 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 PIGMQ9H3S5 423 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 RERGLQ9H628 205 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 BCL2L10Q9HD36 194 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 CTPS2Q9NRF8 586 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 ADAMTS20P59510 1910 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 IRGMA1A4Y4 181 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 OR6C68A6NDL8 312 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 ZNF860A6NHJ4 632 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 TO15178 435 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 SLC31A2O15432 143 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 FZD7O75084 574 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 EPPINO95925 133 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 CHRM4P08173 479 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 CPN1P15169 458 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 TRHRP34981 398 aaPredicted RBP11.94□□□□□ -0.5
FOXN3-219ENST00000615335 LSM11P83369 360 aaKnown RBP eCLIP11.94□□□□□ -0.55e-7■■■□□ 16.1
FOXN3-219ENST00000615335 EFNB1P98172 346 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 ZFP36L1Q07352 338 aaKnown RBP11.94□□□□□ -0.5
FOXN3-219ENST00000615335 CHAF1BQ13112 559 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 TRA2AQ13595 282 aaKnown RBP eCLIP11.94□□□□□ -0.5
FOXN3-219ENST00000615335 LRRN1Q6UXK5 716 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 SLC43A2Q8N370 569 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 DEFB124Q8NES8 71 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 OR9A4Q8NGU2 314 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 OR10K1Q8NGX5 313 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 FGF11Q92914 225 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 IFT27Q9BW83 186 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 ARL6Q9H0F7 186 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 TCF7L1Q9HCS4 588 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 NPDC1Q9NQX5 325 aaPredicted RBP11.94□□□□□ -0.5
FOXN3-219ENST00000615335 AKAP7Q9P0M2 348 aaPredicted RBP11.94□□□□□ -0.5
FOXN3-219ENST00000615335 CBLCQ9ULV8 474 aa11.94□□□□□ -0.5
FOXN3-219ENST00000615335 CNOT1A5YKK6 2376 aaKnown RBP11.93□□□□□ -0.5
FOXN3-219ENST00000615335 SCN2AQ99250 2005 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 PRKRAO75569 313 aaKnown RBP11.93□□□□□ -0.5
FOXN3-219ENST00000615335 CDC123O75794 336 aaPredicted RBP11.93□□□□□ -0.5
FOXN3-219ENST00000615335 ACP2P11117 423 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 PDX1P52945 283 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 FABP5Q01469 135 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 RAB40BQ12829 278 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 ERV3-1Q14264 604 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 SLC36A2Q495M3 483 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 OR2G6Q5TZ20 316 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 PRAMEF17Q5VTA0 474 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 FAM122BQ7Z309 247 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 ARHGEF39Q8N4T4 335 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 BEST4Q8NFU0 473 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 SUN3Q8TAQ9 357 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 THAP6Q8TBB0 222 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 KCTD12Q96CX2 325 aaKnown RBP11.93□□□□□ -0.5
FOXN3-219ENST00000615335 RNFT2Q96EX2 444 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 DMRTA2Q96SC8 542 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 EGLN3Q9H6Z9 239 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 RNF122Q9H9V4 155 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 FGF20Q9NP95 211 aaPredicted RBP11.93□□□□□ -0.5
FOXN3-219ENST00000615335 MRPS18AQ9NVS2 196 aaKnown RBP11.93□□□□□ -0.5
FOXN3-219ENST00000615335 OCIAD1Q9NX40 245 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 MGAT4CQ9UBM8 478 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 METTL1Q9UBP6 276 aaKnown RBP11.93□□□□□ -0.5
FOXN3-219ENST00000615335 GHRLQ9UBU3 117 aa11.93□□□□□ -0.5
FOXN3-219ENST00000615335 KNTC1P50748 2209 aa11.92□□□□□ -0.5
FOXN3-219ENST00000615335 A0A0A6YYC8 382 aaPredicted RBP11.92□□□□□ -0.5
FOXN3-219ENST00000615335 TMEM129A0AVI4 362 aa11.92□□□□□ -0.5
FOXN3-219ENST00000615335 FITM1A5D6W6 292 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms