RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 NIPSNAP1Q9BPW8 284 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 SGIP1Q9BQI5 828 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 NSG2Q9Y328 171 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 ACOD1A6NK06 481 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 XRCC3O43542 346 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 HAPLN1P10915 354 aaPredicted RBP12.78□□□□□ -0.36
CHD1-212ENST00000614616 PGCP20142 388 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 CLDN12P56749 244 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 CARD17Q5XLA6 110 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 HSD17B13Q7Z5P4 300 aaPredicted RBP12.78□□□□□ -0.36
CHD1-212ENST00000614616 BVESQ8NE79 360 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 PKD1L3Q7Z443 1732 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 ZNF727A8MUV8 499 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 B4GALT2O60909 372 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 PIM1P11309 404 aaPredicted RBP12.78□□□□□ -0.36
CHD1-212ENST00000614616 ABCD3P28288 659 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 POU3F4P49335 361 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 BIDP55957 195 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 PLP2Q04941 152 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 TIGD5Q53EQ6 642 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 ASPGQ86U10 573 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 LRRTM1Q86UE6 522 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 NRSN1Q8IZ57 195 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 PRSS35Q8N3Z0 413 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 CERS5Q8N5B7 392 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 TRAV27A0A087WT01 109 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 A0A1B0GTW7 788 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 ZNF207O43670 478 aaKnown RBP12.78□□□□□ -0.36
CHD1-212ENST00000614616 VGLL4Q14135 290 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 HLXQ14774 488 aaPredicted RBP12.78□□□□□ -0.36
CHD1-212ENST00000614616 XAF1Q6GPH4 301 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 GALNT16Q8N428 558 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 WFIKKN2Q8TEU8 576 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 FAM3DQ96BQ1 224 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 MRPL38Q96DV4 380 aaKnown RBP12.78□□□□□ -0.36
CHD1-212ENST00000614616 MEGF10Q96KG7 1140 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 PARP12Q9H0J9 701 aaKnown RBP12.78□□□□□ -0.36
CHD1-212ENST00000614616 TMEM38AQ9H6F2 299 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 MED20Q9H944 212 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.78□□□□□ -0.36
CHD1-212ENST00000614616 TSPAN6O43657 245 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 GALTP07902 379 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 EPXP11678 715 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 HAAOP46952 286 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 ZNF133P52736 654 aaPredicted RBP12.78□□□□□ -0.36
CHD1-212ENST00000614616 BAXQ07812 192 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 TRIM61Q5EBN2 209 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 SHEQ5VZ18 495 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 LGI3Q8N145 548 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 DCAF4L2Q8NA75 395 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 NOL4LQ96MY1 436 aaPredicted RBP12.78□□□□□ -0.36
CHD1-212ENST00000614616 NAA11Q9BSU3 229 aaPredicted RBP12.78□□□□□ -0.36
CHD1-212ENST00000614616 GLIS2Q9BZE0 524 aaPredicted RBP12.78□□□□□ -0.36
CHD1-212ENST00000614616 DPEP1P16444 411 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 HNF4GQ14541 408 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 SOWAHCQ53LP3 525 aaPredicted RBP12.78□□□□□ -0.36
CHD1-212ENST00000614616 L3MBTL4Q8NA19 623 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 OR13C8Q8NGS7 320 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 OR13D1Q8NGV5 346 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 ST6GAL2Q96JF0 529 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 TMEM59Q9BXS4 323 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 SLC35A3Q9Y2D2 325 aa12.78□□□□□ -0.36
CHD1-212ENST00000614616 SPATA31A5Q5VU36 1347 aa12.77□□□□□ -0.36
CHD1-212ENST00000614616 SPATA31A7Q8IWB4 1347 aa12.77□□□□□ -0.36
CHD1-212ENST00000614616 RAB27BO00194 218 aa12.77□□□□□ -0.36
CHD1-212ENST00000614616 CTSOP43234 321 aaPredicted RBP12.77□□□□□ -0.36
CHD1-212ENST00000614616 SLC6A8P48029 635 aa12.77□□□□□ -0.36
CHD1-212ENST00000614616 KCNJ3P48549 501 aa12.77□□□□□ -0.36
CHD1-212ENST00000614616 C11orf87Q6NUJ2 197 aa12.77□□□□□ -0.36
CHD1-212ENST00000614616 ZNF383Q8NA42 475 aa12.77□□□□□ -0.36
CHD1-212ENST00000614616 SOX18P35713 384 aa12.77□□□□□ -0.36
CHD1-212ENST00000614616 RFC3P40938 356 aa12.77□□□□□ -0.36
CHD1-212ENST00000614616 HTR6P50406 440 aa12.77□□□□□ -0.36
CHD1-212ENST00000614616 SYT14P1Q58G82 188 aa12.77□□□□□ -0.36
CHD1-212ENST00000614616 TOMM20LQ6UXN7 152 aa12.77□□□□□ -0.36
CHD1-212ENST00000614616 SPICQ8N5J4 248 aa12.77□□□□□ -0.36
CHD1-212ENST00000614616 HSD17B11Q8NBQ5 300 aa12.77□□□□□ -0.36
CHD1-212ENST00000614616 LMX1AQ8TE12 382 aa12.77□□□□□ -0.36
CHD1-212ENST00000614616 CA5BP1Q8WTZ4 195 aa12.77□□□□□ -0.36
CHD1-212ENST00000614616 GDF2Q9UK05 429 aaPredicted RBP12.77□□□□□ -0.36
CHD1-212ENST00000614616 TRBV23OR9-2A0A075B6M9 112 aa12.77□□□□□ -0.37
CHD1-212ENST00000614616 POU3F3P20264 500 aaPredicted RBP12.77□□□□□ -0.37
CHD1-212ENST00000614616 HMGCLP35914 325 aa12.77□□□□□ -0.37
CHD1-212ENST00000614616 OR10A3P58181 314 aa12.77□□□□□ -0.37
CHD1-212ENST00000614616 ID2Q02363 134 aa12.77□□□□□ -0.37
CHD1-212ENST00000614616 SLC14A2Q15849 920 aa12.77□□□□□ -0.37
CHD1-212ENST00000614616 GABRG1Q8N1C3 465 aa12.77□□□□□ -0.37
CHD1-212ENST00000614616 RASD2Q96D21 266 aa12.77□□□□□ -0.37
CHD1-212ENST00000614616 WDR89Q96FK6 387 aaPredicted RBP12.77□□□□□ -0.37
CHD1-212ENST00000614616 F2RL3Q96RI0 385 aa12.77□□□□□ -0.37
CHD1-212ENST00000614616 WTIPA6NIX2 430 aaPredicted RBP12.77□□□□□ -0.37
CHD1-212ENST00000614616 M0QYG6 137 aa12.77□□□□□ -0.37
CHD1-212ENST00000614616 PCBP4P57723 403 aaKnown RBP12.77□□□□□ -0.37
CHD1-212ENST00000614616 PPP1CBP62140 327 aa12.77□□□□□ -0.37
CHD1-212ENST00000614616 ZFPM2Q8WW38 1151 aa12.77□□□□□ -0.37
CHD1-212ENST00000614616 SIPA1L3O60292 1781 aaPredicted RBP12.77□□□□□ -0.37
CHD1-212ENST00000614616 ZNF354AO60765 605 aaPredicted RBP12.77□□□□□ -0.37
CHD1-212ENST00000614616 TBPP20226 339 aa12.77□□□□□ -0.37
CHD1-212ENST00000614616 MAT1AQ00266 395 aaKnown RBP12.77□□□□□ -0.37
CHD1-212ENST00000614616 MELKQ14680 651 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms