RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 ZGLP1P0C6A0 271 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 ANXA7P20073 488 aaKnown RBP7.94□□□□□ -1.14
LIG4-204ENST00000611712 CDK2P24941 298 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 SDHAP31040 664 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 GALK2Q01415 458 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 ZNF85Q03923 595 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 RPL18Q07020 188 aaKnown RBP7.94□□□□□ -1.14
LIG4-204ENST00000611712 OPCMLQ14982 345 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 SMAD2Q15796 467 aaKnown RBP7.94□□□□□ -1.14
LIG4-204ENST00000611712 YOD1Q5VVQ6 348 aaPredicted RBP7.94□□□□□ -1.14
LIG4-204ENST00000611712 WDR88Q6ZMY6 472 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 ZNF283Q8N7M2 679 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 PNLDC1Q8NA58 520 aaKnown RBP7.94□□□□□ -1.14
LIG4-204ENST00000611712 ZNF587Q96SQ5 575 aaPredicted RBP7.94□□□□□ -1.14
LIG4-204ENST00000611712 NXF5Q9H1B4 397 aaKnown RBP7.94□□□□□ -1.14
LIG4-204ENST00000611712 MCCC2Q9HCC0 563 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 KLK11Q9UBX7 282 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 ING1Q9UK53 422 aaPredicted RBP7.94□□□□□ -1.14
LIG4-204ENST00000611712 POMT2Q9UKY4 750 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 TMEM269A0A1B0GVZ9 245 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 ZNF736B4DX44 427 aaPredicted RBP7.93□□□□□ -1.14
LIG4-204ENST00000611712 SUSD5O60279 629 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 SPDEFO95238 335 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 OPN1LWP04000 364 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 HRGP04196 525 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 CELA2BP08218 269 aaPredicted RBP7.93□□□□□ -1.14
LIG4-204ENST00000611712 LIPCP11150 499 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 SLC6A1P30531 599 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 DHPSP49366 369 aaPredicted RBP7.93□□□□□ -1.14
LIG4-204ENST00000611712 MMP15P51511 669 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 IFITM2Q01629 132 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 RBMS2Q15434 407 aaKnown RBP7.93□□□□□ -1.14
LIG4-204ENST00000611712 KDM8Q8N371 416 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 OR14A16Q8NHC5 309 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 SMIM4Q8WVI0 70 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 FAM46BQ96A09 425 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 MFFQ9GZY8 342 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 HRASLSQ9HDD0 168 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 SCN2AQ99250 2005 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 TRAV36DV7A0A075B6V5 113 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 OR6C68A6NDL8 312 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 TLCD2A6NGC4 264 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 POM121CA8CG34 1229 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 DVL2O14641 736 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 ZNF208O43345 1280 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 ZNF749O43361 778 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 SULT1B1O43704 296 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 PGAM2P15259 253 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 GABRG2P18507 467 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 POU3F4P49335 361 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 DCAF7P61962 342 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 DYRK1AQ13627 763 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 HTR4Q13639 388 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 MELKQ14680 651 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 PHF19Q5T6S3 580 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 FAM69BQ5VUD6 431 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 PLPP7Q8NBV4 271 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 ASB17Q8WXJ9 295 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 ASB12Q8WXK4 309 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 PRSS27Q9BQR3 290 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 AICDAQ9GZX7 198 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 ETV7Q9Y603 341 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 ARID1AO14497 2285 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 TMED7-TICAM2A0A0A6YYA0 188 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 F5H0A9 414 aaPredicted RBP7.93□□□□□ -1.14
LIG4-204ENST00000611712 SYT7O43581 403 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 PTHLHP12272 177 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 CD34P28906 385 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 GFERP55789 205 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 TAS2R20P59543 309 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 PSG6Q00889 435 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 POU3F1Q03052 451 aaPredicted RBP7.93□□□□□ -1.14
LIG4-204ENST00000611712 CHAF1BQ13112 559 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 SMCO1Q147U7 214 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 GRK1Q15835 563 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 DMKNQ6E0U4 476 aaPredicted RBP7.93□□□□□ -1.14
LIG4-204ENST00000611712 ZNF704Q6ZNC4 412 aaPredicted RBP7.93□□□□□ -1.14
LIG4-204ENST00000611712 FOXRED2Q8IWF2 684 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 SFTPA2Q8IWL1 248 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 PDZD9Q8IXQ8 264 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 OR4D9Q8NGE8 314 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 DVL3Q92997 716 aaPredicted RBP7.93□□□□□ -1.14
LIG4-204ENST00000611712 TSLPQ969D9 159 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 LPAR4Q99677 370 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 GABRG3Q99928 467 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 SLC19A3Q9BZV2 496 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 PTGES2Q9H7Z7 377 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 METTL8Q9H825 291 aaKnown RBP7.93□□□□□ -1.14
LIG4-204ENST00000611712 ZMAT3Q9HA38 289 aaKnown RBP7.93□□□□□ -1.14
LIG4-204ENST00000611712 PRDM9Q9NQV7 894 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 B3GNT2Q9NY97 397 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 ZNF346Q9UL40 294 aaKnown RBP7.93□□□□□ -1.14
LIG4-204ENST00000611712 YBX2Q9Y2T7 364 aaKnown RBP7.93□□□□□ -1.14
LIG4-204ENST00000611712 TMED7Q9Y3B3 224 aa7.93□□□□□ -1.14
LIG4-204ENST00000611712 SPTY2D1-AS1A0A0U1RR47 76 aa7.92□□□□□ -1.14
LIG4-204ENST00000611712 CYR61O00622 381 aa7.92□□□□□ -1.14
LIG4-204ENST00000611712 LANCL1O43813 399 aa7.92□□□□□ -1.14
LIG4-204ENST00000611712 ZFPL1O95159 310 aa7.92□□□□□ -1.14
LIG4-204ENST00000611712 SIX6O95475 246 aa7.92□□□□□ -1.14
LIG4-204ENST00000611712 AKR1C4P17516 323 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms