RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 STOML3Q8TAV4 291 aa10.9□□□□□ -0.66
TP53-220ENST00000610623 THAP3Q8WTV1 239 aaPredicted RBP10.9□□□□□ -0.66
TP53-220ENST00000610623 SNX33Q8WV41 574 aa10.9□□□□□ -0.66
TP53-220ENST00000610623 C16orf58Q96GQ5 468 aa10.9□□□□□ -0.66
TP53-220ENST00000610623 LRRC3BQ96PB8 259 aa10.9□□□□□ -0.66
TP53-220ENST00000610623 PRSS27Q9BQR3 290 aa10.9□□□□□ -0.66
TP53-220ENST00000610623 SLITRK2Q9H156 845 aa10.9□□□□□ -0.66
TP53-220ENST00000610623 SLC25A18Q9H1K4 315 aa10.9□□□□□ -0.66
TP53-220ENST00000610623 PELI2Q9HAT8 420 aa10.9□□□□□ -0.66
TP53-220ENST00000610623 MMP26Q9NRE1 261 aa10.9□□□□□ -0.66
TP53-220ENST00000610623 SMCO4Q9NRQ5 59 aa10.9□□□□□ -0.66
TP53-220ENST00000610623 ZNF281Q9Y2X9 895 aa10.9□□□□□ -0.66
TP53-220ENST00000610623 SLC22A7Q9Y694 548 aa10.9□□□□□ -0.66
TP53-220ENST00000610623 LRIT2A6NDA9 550 aa10.9□□□□□ -0.67
TP53-220ENST00000610623 GGT3PA6NGU5 568 aa10.9□□□□□ -0.67
TP53-220ENST00000610623 OR6C76A6NM76 312 aa10.9□□□□□ -0.67
TP53-220ENST00000610623 F5H0A9 414 aaPredicted RBP10.9□□□□□ -0.67
TP53-220ENST00000610623 MAKP20794 623 aa10.9□□□□□ -0.67
TP53-220ENST00000610623 ITPKBP27987 946 aa10.9□□□□□ -0.67
TP53-220ENST00000610623 CENPAP49450 140 aa10.9□□□□□ -0.67
TP53-220ENST00000610623 INPP5JQ15735 1006 aaPredicted RBP10.9□□□□□ -0.67
TP53-220ENST00000610623 FNDC3BQ53EP0 1204 aaKnown RBP10.9□□□□□ -0.67
TP53-220ENST00000610623 TMPRSS11FQ6ZWK6 438 aa10.9□□□□□ -0.67
TP53-220ENST00000610623 NDUFAF7Q7L592 441 aa10.9□□□□□ -0.67
TP53-220ENST00000610623 PARGQ86W56 976 aa10.9□□□□□ -0.67
TP53-220ENST00000610623 RPS4Y2Q8TD47 263 aa10.9□□□□□ -0.67
TP53-220ENST00000610623 RNF141Q8WVD5 230 aa10.9□□□□□ -0.67
TP53-220ENST00000610623 RSPRY1Q96DX4 576 aa10.9□□□□□ -0.67
TP53-220ENST00000610623 DTD2Q96FN9 168 aa10.9□□□□□ -0.67
TP53-220ENST00000610623 CHST6Q9GZX3 395 aa10.9□□□□□ -0.67
TP53-220ENST00000610623 POFUT1Q9H488 388 aa10.9□□□□□ -0.67
TP53-220ENST00000610623 TREM1Q9NP99 234 aa10.9□□□□□ -0.67
TP53-220ENST00000610623 OBP2AQ9NY56 170 aa10.9□□□□□ -0.67
TP53-220ENST00000610623 DHCR7Q9UBM7 475 aaKnown RBP10.9□□□□□ -0.67
TP53-220ENST00000610623 ZNF230Q9UIE0 474 aaPredicted RBP10.9□□□□□ -0.67
TP53-220ENST00000610623 ZNF337Q9Y3M9 751 aa10.9□□□□□ -0.67
TP53-220ENST00000610623 KIAA0100Q14667 2235 aaKnown RBP10.89□□□□□ -0.67
TP53-220ENST00000610623 GXYLT2A0PJZ3 443 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 OR2AT4A6NND4 320 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 PHYHO14832 338 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 TO15178 435 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 ST8SIA5O15466 376 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 NDUFS4O43181 175 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 FADS1O60427 444 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 ICOSLGO75144 302 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 RPLP1P05386 114 aaKnown RBP10.89□□□□□ -0.67
TP53-220ENST00000610623 GTF2F2P13984 249 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 CASRP41180 1078 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 TAF13Q15543 124 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 HNRNPA1L2Q32P51 320 aaKnown RBP10.89□□□□□ -0.67
TP53-220ENST00000610623 STPG1Q5TH74 334 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 C17orf64Q86WR6 236 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 RFLNBQ8N5W9 214 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 TMEM239Q8WW34 195 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 SMARCD2Q92925 531 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 SLC25A21Q9BQT8 299 aaPredicted RBP10.89□□□□□ -0.67
TP53-220ENST00000610623 SFXN1Q9H9B4 322 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 PRMT8Q9NR22 394 aaPredicted RBP10.89□□□□□ -0.67
TP53-220ENST00000610623 CLDND1Q9NY35 253 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 DEC1Q9P2X7 70 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 GHRLQ9UBU3 117 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 GNG8Q9UK08 70 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 SIGLEC7Q9Y286 467 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 TBC1D3EA0A087X179 549 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 A0A0A6YYD5 115 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 EMC8O43402 210 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 IFNGP01579 166 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 ZNF44P15621 663 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 FUT1P19526 365 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 NFYBP25208 207 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 STARD6P59095 220 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 GGTLC2Q14390 218 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 PDGFRLQ15198 375 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 OR4C11Q6IEV9 310 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 SPRED2Q7Z698 418 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 RANBP3LQ86VV4 465 aaPredicted RBP10.89□□□□□ -0.67
TP53-220ENST00000610623 INO80EQ8NBZ0 244 aaPredicted RBP10.89□□□□□ -0.67
TP53-220ENST00000610623 CNN2Q99439 309 aaKnown RBP10.89□□□□□ -0.67
TP53-220ENST00000610623 IL21RQ9HBE5 538 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 FBXL4Q9UKA2 621 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 ZNF443Q9Y2A4 671 aaPredicted RBP10.89□□□□□ -0.67
TP53-220ENST00000610623 DMRT1Q9Y5R6 373 aa10.89□□□□□ -0.67
TP53-220ENST00000610623 ATG2AQ2TAZ0 1938 aa10.88□□□□□ -0.67
TP53-220ENST00000610623 SIAH2O43255 324 aa10.88□□□□□ -0.67
TP53-220ENST00000610623 POP7O75817 140 aaKnown RBP10.88□□□□□ -0.67
TP53-220ENST00000610623 SCGB1D2O95969 90 aa10.88□□□□□ -0.67
TP53-220ENST00000610623 CBR1P16152 277 aa10.88□□□□□ -0.67
TP53-220ENST00000610623 AGAP20933 346 aa10.88□□□□□ -0.67
TP53-220ENST00000610623 VIPR2P41587 438 aa10.88□□□□□ -0.67
TP53-220ENST00000610623 PGDP52209 483 aa10.88□□□□□ -0.67
TP53-220ENST00000610623 SRSF3P84103 164 aaKnown RBP10.88□□□□□ -0.67
TP53-220ENST00000610623 NAAAQ02083 359 aa10.88□□□□□ -0.67
TP53-220ENST00000610623 LTBQ06643 244 aa10.88□□□□□ -0.67
TP53-220ENST00000610623 PJVKQ0ZLH3 352 aa10.88□□□□□ -0.67
TP53-220ENST00000610623 ZNF234Q14588 700 aa10.88□□□□□ -0.67
TP53-220ENST00000610623 FAM78AQ5JUQ0 283 aa10.88□□□□□ -0.67
TP53-220ENST00000610623 STAC2Q6ZMT1 411 aa10.88□□□□□ -0.67
TP53-220ENST00000610623 TMEM200AQ86VY9 491 aa10.88□□□□□ -0.67
TP53-220ENST00000610623 WDSUB1Q8N9V3 476 aa10.88□□□□□ -0.67
TP53-220ENST00000610623 CYB561A3Q8NBI2 242 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms