RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 TMPRSS11FQ6ZWK6 438 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 LINC00346Q8IVM7 164 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF687Q8N1G0 1237 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 C12orf45Q8N5I9 185 aaPredicted RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 OR11H7Q8NGC8 314 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 FAM174AQ8TBP5 190 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 SLC2A12Q8TD20 617 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 RBPMSQ93062 196 aaKnown RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 YIPF5Q969M3 257 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 LYRM4Q9HD34 91 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 MEPEQ9NQ76 525 aaPredicted RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 PTTG3PQ9NZH4 202 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 SLC22A13Q9Y226 551 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 RTTNQ86VV8 2226 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 A0A0B4J293 547 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 KIR2DS5A0A0G2JLQ3 304 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 A0A0G2JNG1 304 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 OR6C68A6NDL8 312 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF726A6NNF4 738 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 KIR2DS3K7RE56 304 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 AIPO00170 330 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 LGALS8O00214 317 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 BHLHE40O14503 412 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 CCSO14618 274 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 IMPA2O14732 288 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 EPPINO95925 133 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 SCGB1D2O95969 90 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 IGHA1P01876 353 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 ZGLP1P0C6A0 271 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF250P15622 560 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 TPMTP51580 245 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 MRPS10P82664 201 aaKnown RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 GUCA2AQ02747 115 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 PUDPQ08623 228 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 RASGEF1BQ0VAM2 473 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 KIR2DS5Q14953 304 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 SLC25A30Q5SVS4 291 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 TMEM225Q6GV28 225 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 NLRC3Q7RTR2 1065 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 OVCH1Q7RTY7 1134 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 CA13Q8N1Q1 262 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 BPIFB2Q8N4F0 458 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 C19orf47Q8N9M1 422 aaKnown RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 SMIM4Q8WVI0 70 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 ASB12Q8WXK4 309 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 DAZLQ92904 295 aaKnown RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 LMF2Q9BU23 707 aaKnown RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 SAV1Q9H4B6 383 aaPredicted RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 B8ZZF3 427 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 UTS2O95399 124 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 HLA-AP01891 365 aaKnown RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 TP53P04637 393 aaPredicted RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 PEBP1P30086 187 aaKnown RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 CTHP32929 405 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF136P52737 540 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 AIMP2Q13155 320 aaKnown RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 SMCO1Q147U7 214 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 ELOCQ15369 112 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 RNLSQ5VYX0 342 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF425Q6IV72 752 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 C19orf48Q6RUI8 117 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 GSG1LQ6UXU4 331 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 STAC2Q6ZMT1 411 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 GKN2Q86XP6 184 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF454Q8N9F8 522 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 RELL2Q8NC24 303 aaPredicted RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 TMEM185AQ8NFB2 350 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 BAHD1Q8TBE0 780 aaPredicted RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 HSD17B8Q92506 261 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 FAM3DQ96BQ1 224 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 CPNE2Q96FN4 548 aaPredicted RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 FAM71F1Q96KD3 344 aaPredicted RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 NARFLQ9H6Q4 476 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 METTL7AQ9H8H3 244 aa6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 CHMP1AQ9HD42 196 aaPredicted RBP6.28□□□□□ -1.4
SYNPO2-206ENST00000610556 TMEM269A0A1B0GVZ9 245 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 TMEM82A0PJX8 343 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 EFCAB7A8K855 629 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 ZNF705EA8MWA4 302 aaPredicted RBP6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 PRAMEF26H0Y7S4 382 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 CTNSO60931 367 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 MPIG6BO95866 241 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 S100A11P31949 105 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 MMP15P51511 669 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 EEF1A1P68104 462 aaKnown RBP6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 GLO1Q04760 184 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 SERTAD2Q14140 314 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 OR7A5Q15622 319 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 SGCAQ16586 387 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 DMRTC1Q5HYR2 192 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 NKAIN2Q5VXU1 208 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 SIGIRRQ6IA17 410 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 FAM109BQ6ICB4 259 aaPredicted RBP6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 STEAP1BQ6NZ63 245 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 ARSKQ6UWY0 536 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 MAMSTRQ6ZN01 415 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 MARCH3Q86UD3 253 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 LIX1LQ8IVB5 337 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 CRIPAKQ8N1N5 446 aa6.27□□□□□ -1.41
SYNPO2-206ENST00000610556 ZNF283Q8N7M2 679 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms