RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 ZNF813Q6ZN06 617 aa16.74■□□□□ 0.27
CTSA-217ENST00000607482 SLC35D2Q76EJ3 337 aa16.74■□□□□ 0.27
CTSA-217ENST00000607482 OR4F15Q8NGB8 312 aa16.74■□□□□ 0.27
CTSA-217ENST00000607482 PCDHAC1Q9H158 963 aa16.74■□□□□ 0.27
CTSA-217ENST00000607482 HEATR1Q9H583 2144 aaKnown RBP16.74■□□□□ 0.27
CTSA-217ENST00000607482 EFCAB1Q9HAE3 211 aa16.74■□□□□ 0.27
CTSA-217ENST00000607482 A0A1W2PRG6 482 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 MCIDASD6RGH6 385 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 ENTPD5O75356 428 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 OR5F1O95221 314 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 CECR9P0C854 216 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 COX4I1P13073 169 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 CBR1P16152 277 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 TNFRSF1BP20333 461 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 NAAAQ02083 359 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 C3orf36Q3SXR2 165 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 WDR88Q6ZMY6 472 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 SLC46A3Q7Z3Q1 461 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 MICU2Q8IYU8 434 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 FAM169BQ8N8A8 192 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 MAPK1IP1LQ8NDC0 245 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 IL17RDQ8NFM7 739 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 HTRA1Q92743 480 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 ZNF566Q969W8 418 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 POLR2J2Q9GZM3 115 aaKnown RBP16.73■□□□□ 0.27
CTSA-217ENST00000607482 FAM107BQ9H098 131 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 POLR2J3Q9H1A7 115 aaKnown RBP16.73■□□□□ 0.27
CTSA-217ENST00000607482 CA10Q9NS85 328 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 RIMS3Q9UJD0 308 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 FKBP7Q9Y680 259 aa16.73■□□□□ 0.27
CTSA-217ENST00000607482 RAB36O95755 333 aa16.72■□□□□ 0.27
CTSA-217ENST00000607482 BCL10O95999 233 aa16.72■□□□□ 0.27
CTSA-217ENST00000607482 KDELR2P33947 212 aa16.72■□□□□ 0.27
CTSA-217ENST00000607482 RBM34P42696 430 aaKnown RBP16.72■□□□□ 0.27
CTSA-217ENST00000607482 PIGFQ07326 219 aa16.72■□□□□ 0.27
CTSA-217ENST00000607482 GSG1Q2KHT4 349 aa16.72■□□□□ 0.27
CTSA-217ENST00000607482 MDP1Q86V88 176 aa16.72■□□□□ 0.27
CTSA-217ENST00000607482 LRRC17Q8N6Y2 441 aa16.72■□□□□ 0.27
CTSA-217ENST00000607482 ZNF837Q96EG3 531 aaPredicted RBP16.72■□□□□ 0.27
CTSA-217ENST00000607482 VRK1Q99986 396 aaPredicted RBP16.72■□□□□ 0.27
CTSA-217ENST00000607482 MED31Q9Y3C7 131 aa16.72■□□□□ 0.27
CTSA-217ENST00000607482 SPEF1Q9Y4P9 236 aa16.72■□□□□ 0.27
CTSA-217ENST00000607482 H7C417 338 aa16.71■□□□□ 0.27
CTSA-217ENST00000607482 NDUFAB1O14561 156 aa16.71■□□□□ 0.27
CTSA-217ENST00000607482 ATP8B1O43520 1251 aa16.71■□□□□ 0.27
CTSA-217ENST00000607482 ZNF682O95780 498 aa16.71■□□□□ 0.27
CTSA-217ENST00000607482 HLA-HP01893 362 aa16.71■□□□□ 0.27
CTSA-217ENST00000607482 MT-ND1P03886 318 aa16.71■□□□□ 0.27
CTSA-217ENST00000607482 THY1P04216 161 aa16.71■□□□□ 0.27
CTSA-217ENST00000607482 ERCC1P07992 297 aaPredicted RBP16.71■□□□□ 0.27
CTSA-217ENST00000607482 OR4A8P0C604 315 aa16.71■□□□□ 0.27
CTSA-217ENST00000607482 B4GALT1P15291 398 aa16.71■□□□□ 0.27
CTSA-217ENST00000607482 HOXB4P17483 251 aaPredicted RBP16.71■□□□□ 0.27
CTSA-217ENST00000607482 LSP1P33241 339 aa16.71■□□□□ 0.27
CTSA-217ENST00000607482 CLRN1P58418 232 aa16.71■□□□□ 0.27
CTSA-217ENST00000607482 PIN1Q13526 163 aaPredicted RBP16.71■□□□□ 0.27
CTSA-217ENST00000607482 PHYHD1Q5SRE7 291 aa16.71■□□□□ 0.27
CTSA-217ENST00000607482 C11orf71Q6IPW1 123 aa16.71■□□□□ 0.27
CTSA-217ENST00000607482 HDDC2Q7Z4H3 204 aa16.71■□□□□ 0.27
CTSA-217ENST00000607482 SPATA21Q7Z572 469 aa16.71■□□□□ 0.27
CTSA-217ENST00000607482 OR6X1Q8NH79 312 aa16.71■□□□□ 0.27
CTSA-217ENST00000607482 TMEM239Q8WW34 195 aa16.71■□□□□ 0.27
CTSA-217ENST00000607482 SGTBQ96EQ0 304 aa16.71■□□□□ 0.27
CTSA-217ENST00000607482 HOPXQ9BPY8 73 aaPredicted RBP16.71■□□□□ 0.27
CTSA-217ENST00000607482 ELAC2Q9BQ52 826 aaKnown RBP16.71■□□□□ 0.27
CTSA-217ENST00000607482 NSRP1Q9H0G5 558 aaKnown RBP16.71■□□□□ 0.27
CTSA-217ENST00000607482 CRNNQ9UBG3 495 aaPredicted RBP16.71■□□□□ 0.27
CTSA-217ENST00000607482 GMNNO75496 209 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 FARS2O95363 451 aaKnown RBP16.7■□□□□ 0.26
CTSA-217ENST00000607482 IGHG1P01857 330 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 THRBP10828 461 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 FUT1P19526 365 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 PTDSS1P48651 473 aaKnown RBP16.7■□□□□ 0.26
CTSA-217ENST00000607482 NUDT2P50583 147 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 EFNA4P52798 201 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 CRYBA2P53672 197 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 SELENOWP63302 87 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 GALK2Q01415 458 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 LIPEQ05469 1076 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 ST3GAL3Q11203 375 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 ZP4Q12836 540 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 CARTPTQ16568 116 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 FKBP9P1Q75LS8 142 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 CPLX4Q7Z7G2 160 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 TMEM255BQ8WV15 326 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 FAM168AQ92567 244 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 CMTM5Q96DZ9 223 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 SLC25A44Q96H78 314 aaPredicted RBP16.7■□□□□ 0.26
CTSA-217ENST00000607482 FOXB1Q99853 325 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 NELFAQ9H3P2 528 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 TAS2R5Q9NYW4 299 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 GLTPQ9NZD2 209 aa16.7■□□□□ 0.26
CTSA-217ENST00000607482 B9A039 149 aa16.69■□□□□ 0.26
CTSA-217ENST00000607482 UBL3O95164 117 aa16.69■□□□□ 0.26
CTSA-217ENST00000607482 LYPD3O95274 346 aa16.69■□□□□ 0.26
CTSA-217ENST00000607482 IGKV3-15P01624 115 aa16.69■□□□□ 0.26
CTSA-217ENST00000607482 IGLV1-44P01699 117 aa16.69■□□□□ 0.26
CTSA-217ENST00000607482 IFNW1P05000 195 aa16.69■□□□□ 0.26
CTSA-217ENST00000607482 CELA3BP08861 270 aa16.69■□□□□ 0.26
CTSA-217ENST00000607482 CSF3P09919 207 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms