RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 LINC00346Q8IVM7 164 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 RGP1Q92546 391 aaPredicted RBP14.36□□□□□ -0.11
CTSA-214ENST00000606788 MR1Q95460 341 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 TTYH2Q9BSA4 534 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 TMEM43Q9BTV4 400 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 NMNAT2Q9BZQ4 307 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 BEX1Q9HBH7 125 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 INPP5EQ9NRR6 644 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 SRPK3Q9UPE1 567 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 SPTBN2O15020 2390 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 FAM240BA0A1B0GVZ2 78 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 MEIOCA2RUB1 952 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 PMS2P1A4D2B8 440 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 F10P00742 488 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 CTLA4P16410 223 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 GALNSP34059 522 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 CDONQ4KMG0 1287 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 HSD17B12Q53GQ0 312 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 CORO6Q6QEF8 472 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 POMGNT2Q8NAT1 580 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 C5orf34Q96MH7 638 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 CHRNA10Q9GZZ6 450 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 SLC22A4Q9H015 551 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 FRYQ5TBA9 3013 aa14.36□□□□□ -0.11
CTSA-214ENST00000606788 TRAV36DV7A0A075B6V5 113 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 A0A1W2PNR3 127 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 FLRT2O43155 660 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 AHSA1O95433 338 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 RENP00797 406 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 SFTPDP35247 375 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 TALDO1P37837 337 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 PNLIPRP2P54317 469 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 FOXF1Q12946 379 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 LGALS14Q8TCE9 139 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 NSMAFQ92636 917 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 PPP1R14BQ96C90 147 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 TXNDC15Q96J42 360 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 JSRP1Q96MG2 331 aaPredicted RBP14.35□□□□□ -0.11
CTSA-214ENST00000606788 DUSP23Q9BVJ7 150 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 JAM3Q9BX67 310 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 KCNK15Q9H427 330 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 METTL7AQ9H8H3 244 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 SLCO1C1Q9NYB5 712 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 SLC22A13Q9Y226 551 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 A0A0B4J293 547 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 H0YC42 278 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 IMPDH2P12268 514 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 KLK2P20151 261 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 ADH7P40394 386 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 ACTA2P62736 377 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 ACTG2P63267 376 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 OR7E24Q6IFN5 339 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 MAMDC2Q7Z304 686 aaPredicted RBP14.35□□□□□ -0.11
CTSA-214ENST00000606788 GPAT4Q86UL3 456 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 GDPD1Q8N9F7 314 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 CAPSLQ8WWF8 208 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 SPSB2Q99619 263 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 SLC19A3Q9BZV2 496 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 TRAV6A0A075B6T7 132 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 ZNF593O00488 134 aaPredicted RBP14.35□□□□□ -0.11
CTSA-214ENST00000606788 FZD7O75084 574 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 TAS2R43P59537 309 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 DCAF7P61962 342 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 BDH1Q02338 343 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 KCNJ8Q15842 424 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 AGAP6Q5VW22 663 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 FAM220AQ7Z4H9 259 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 ZNF676Q8N7Q3 588 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 PLPP5Q8NEB5 264 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 AGAP4Q96P64 663 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 FYTTD1Q96QD9 318 aaKnown RBP14.35□□□□□ -0.11
CTSA-214ENST00000606788 WDR77Q9BQA1 342 aaPredicted RBP14.35□□□□□ -0.11
CTSA-214ENST00000606788 FRRS1LQ9P0K9 344 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 MYEF2Q9P2K5 600 aaKnown RBP14.35□□□□□ -0.11
CTSA-214ENST00000606788 NOX1Q9Y5S8 564 aa14.35□□□□□ -0.11
CTSA-214ENST00000606788 TMEM200CA6NKL6 621 aa14.34□□□□□ -0.11
CTSA-214ENST00000606788 RCVRNP35243 200 aa14.34□□□□□ -0.11
CTSA-214ENST00000606788 MAP2K3P46734 347 aa14.34□□□□□ -0.11
CTSA-214ENST00000606788 SLC6A8P48029 635 aa14.34□□□□□ -0.11
CTSA-214ENST00000606788 RPS18P62269 152 aaKnown RBP14.34□□□□□ -0.11
CTSA-214ENST00000606788 POU3F1Q03052 451 aaPredicted RBP14.34□□□□□ -0.11
CTSA-214ENST00000606788 GPR50Q13585 617 aa14.34□□□□□ -0.11
CTSA-214ENST00000606788 TBRG1Q3YBR2 411 aa14.34□□□□□ -0.11
CTSA-214ENST00000606788 FAM69AQ5T7M9 428 aa14.34□□□□□ -0.11
CTSA-214ENST00000606788 CARD17Q5XLA6 110 aa14.34□□□□□ -0.11
CTSA-214ENST00000606788 ZNF441Q8N8Z8 693 aa14.34□□□□□ -0.11
CTSA-214ENST00000606788 COQ7Q99807 217 aa14.34□□□□□ -0.11
CTSA-214ENST00000606788 SIAEQ9HAT2 523 aa14.34□□□□□ -0.11
CTSA-214ENST00000606788 EXOSC3Q9NQT5 275 aaKnown RBP14.34□□□□□ -0.11
CTSA-214ENST00000606788 PCDHGB7Q9Y5F8 929 aa14.34□□□□□ -0.11
CTSA-214ENST00000606788 KRT8P05787 483 aa14.34□□□□□ -0.11
CTSA-214ENST00000606788 IFNGR1P15260 489 aa14.34□□□□□ -0.11
CTSA-214ENST00000606788 HTR3AP46098 478 aa14.34□□□□□ -0.11
CTSA-214ENST00000606788 POLR2HP52434 150 aaKnown RBP14.34□□□□□ -0.11
CTSA-214ENST00000606788 DGCR2P98153 550 aa14.34□□□□□ -0.11
CTSA-214ENST00000606788 INSM1Q01101 510 aaPredicted RBP14.34□□□□□ -0.11
CTSA-214ENST00000606788 ZSWIM7Q19AV6 140 aa14.34□□□□□ -0.11
CTSA-214ENST00000606788 METAP1DQ6UB28 335 aaPredicted RBP14.34□□□□□ -0.11
CTSA-214ENST00000606788 PLET1Q6UQ28 207 aa14.34□□□□□ -0.11
CTSA-214ENST00000606788 TIGD4Q8IY51 512 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms