RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 SOD3P08294 240 aa12.59□□□□□ -0.39
TUBE1-208ENST00000604743 IFI30P13284 250 aa12.59□□□□□ -0.39
TUBE1-208ENST00000604743 MSX2P35548 267 aaPredicted RBP12.59□□□□□ -0.39
TUBE1-208ENST00000604743 AQP2P41181 271 aa12.59□□□□□ -0.39
TUBE1-208ENST00000604743 CSNK1A1P48729 337 aa12.59□□□□□ -0.39
TUBE1-208ENST00000604743 PTH2RP49190 550 aa12.59□□□□□ -0.39
TUBE1-208ENST00000604743 SH3BGRP55822 239 aaPredicted RBP12.59□□□□□ -0.39
TUBE1-208ENST00000604743 RPS4XP62701 263 aaKnown RBP12.59□□□□□ -0.39
TUBE1-208ENST00000604743 LSM11P83369 360 aaKnown RBP eCLIP12.59□□□□□ -0.39
TUBE1-208ENST00000604743 RPL18Q07020 188 aaKnown RBP12.59□□□□□ -0.39
TUBE1-208ENST00000604743 GKAP1Q5VSY0 366 aaPredicted RBP12.59□□□□□ -0.39
TUBE1-208ENST00000604743 MEX3DQ86XN8 651 aaKnown RBP12.59□□□□□ -0.39
TUBE1-208ENST00000604743 PGAM4Q8N0Y7 254 aa12.59□□□□□ -0.39
TUBE1-208ENST00000604743 GTPBP3Q969Y2 492 aaKnown RBP12.59□□□□□ -0.39
TUBE1-208ENST00000604743 ULBP2Q9BZM5 246 aa12.59□□□□□ -0.39
TUBE1-208ENST00000604743 NELFAQ9H3P2 528 aa12.59□□□□□ -0.39
TUBE1-208ENST00000604743 POFUT2Q9Y2G5 429 aa12.59□□□□□ -0.39
TUBE1-208ENST00000604743 ZNF469Q96JG9 3925 aaPredicted RBP12.59□□□□□ -0.39
TUBE1-208ENST00000604743 FLNAP21333 2647 aaKnown RBP12.58□□□□□ -0.39
TUBE1-208ENST00000604743 A0A1W2PRG6 482 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 ZNF99A8MXY4 864 aaPredicted RBP12.58□□□□□ -0.4
TUBE1-208ENST00000604743 E7EQL1 145 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 FFAR1O14842 300 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 BCL10O95999 233 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 DANCRP0C864 163 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 CDKN1AP38936 164 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 LAPTM4AQ15012 233 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 TRAM2Q15035 370 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 PGGHGQ32M88 737 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 SHEQ5VZ18 495 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 C16orf89Q6UX73 402 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 YTHDF3Q7Z739 585 aaKnown RBP12.58□□□□□ -0.4
TUBE1-208ENST00000604743 CYP4Z1Q86W10 505 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 KRTAP1-3Q8IUG1 177 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 NRMQ8IXM6 262 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 DEFB107AQ8IZN7 70 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 OFCC1Q8IZS5 231 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 LRRC75A-AS1Q8N1F1 130 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 FITM2Q8N6M3 262 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 ANKS4BQ8N8V4 417 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 CCDC197Q8NCU1 140 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 OR6X1Q8NH79 312 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 MOSPD2Q8NHP6 518 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 BPIFA2Q96DR5 249 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 BOD1Q96IK1 185 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 LRR1Q96L50 414 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 ADAD1Q96M93 576 aaKnown RBP12.58□□□□□ -0.4
TUBE1-208ENST00000604743 KCNS3Q9BQ31 491 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 TMUB1Q9BVT8 246 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 OBP2BQ9NPH6 170 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 MOKQ9UQ07 419 aa12.58□□□□□ -0.4
TUBE1-208ENST00000604743 ARPC4-TTLL3A0A0A6YYG9 625 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 IGHV1-18A0A0C4DH31 117 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 MCIDASD6RGH6 385 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 ATP6V1G2-DDX39BF2Z307 99 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 hCG_2039718K7EN88 272 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 FAM107AO95990 144 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 SAGP10523 405 aaPredicted RBP12.57□□□□□ -0.4
TUBE1-208ENST00000604743 B4GALT1P15291 398 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 FABP6P51161 128 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 ATP5J2P56134 94 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 NPRL3Q12980 569 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 SAMD4BQ5PRF9 694 aaKnown RBP12.57□□□□□ -0.4
TUBE1-208ENST00000604743 TBPL2Q6SJ96 375 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 B3GLCTQ6Y288 498 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 ZNF730Q6ZMV8 503 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 ZNF813Q6ZN06 617 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 FAM86B1Q8N7N1 296 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 MAGEE2Q8TD90 523 aaPredicted RBP12.57□□□□□ -0.4
TUBE1-208ENST00000604743 IGFBPL1Q8WX77 278 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 ZNF566Q969W8 418 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 SLC38A2Q96QD8 506 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 GSX2Q9BZM3 304 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 INIPQ9NRY2 104 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 MAN2C1Q9NTJ4 1040 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 DCAF13Q9NV06 445 aaKnown RBP12.57□□□□□ -0.4
TUBE1-208ENST00000604743 FAIMQ9NVQ4 179 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 GLTPQ9NZD2 209 aa12.57□□□□□ -0.4
TUBE1-208ENST00000604743 SAMD4AQ9UPU9 718 aaKnown RBP12.57□□□□□ -0.4
TUBE1-208ENST00000604743 FAM32AQ9Y421 112 aaKnown RBP12.57□□□□□ -0.4
TUBE1-208ENST00000604743 ZNF503-AS2A6NEH8 195 aa12.56□□□□□ -0.4
TUBE1-208ENST00000604743 B2RBV5 119 aa12.56□□□□□ -0.4
TUBE1-208ENST00000604743 DIRAS1O95057 198 aa12.56□□□□□ -0.4
TUBE1-208ENST00000604743 IGF2P01344 180 aa12.56□□□□□ -0.4
TUBE1-208ENST00000604743 CD79AP11912 226 aa12.56□□□□□ -0.4
TUBE1-208ENST00000604743 HSD17B1P14061 328 aa12.56□□□□□ -0.4
TUBE1-208ENST00000604743 HOXB1P14653 301 aaPredicted RBP12.56□□□□□ -0.4
TUBE1-208ENST00000604743 MAKP20794 623 aa12.56□□□□□ -0.4
TUBE1-208ENST00000604743 IDH3GP51553 393 aaPredicted RBP12.56□□□□□ -0.4
TUBE1-208ENST00000604743 CLRN1P58418 232 aa12.56□□□□□ -0.4
TUBE1-208ENST00000604743 MYBPC1Q00872 1141 aa12.56□□□□□ -0.4
TUBE1-208ENST00000604743 PIGFQ07326 219 aa12.56□□□□□ -0.4
TUBE1-208ENST00000604743 TOP3AQ13472 1001 aaPredicted RBP12.56□□□□□ -0.4
TUBE1-208ENST00000604743 KRT72Q14CN4 511 aa12.56□□□□□ -0.4
TUBE1-208ENST00000604743 C1QTNF12Q5T7M4 302 aa12.56□□□□□ -0.4
TUBE1-208ENST00000604743 RRM2BQ7LG56 351 aa12.56□□□□□ -0.4
TUBE1-208ENST00000604743 TSEN54Q7Z6J9 526 aaKnown RBP12.56□□□□□ -0.4
TUBE1-208ENST00000604743 FBXL14Q8N1E6 418 aa12.56□□□□□ -0.4
TUBE1-208ENST00000604743 TMEM54Q969K7 222 aa12.56□□□□□ -0.4
TUBE1-208ENST00000604743 SLC25A44Q96H78 314 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms