RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 GCNT7Q6ZNI0 430 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 SEM1Q6ZVN7 128 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 MRPL21Q7Z2W9 205 aaKnown RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 WDFY1Q8IWB7 410 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 NRMQ8IXM6 262 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 ZNF100Q8IYN0 542 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 GABRG1Q8N1C3 465 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 C17orf78Q8N4C9 275 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 LILRA3Q8N6C8 439 aaPredicted RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 NLGN4YQ8NFZ3 816 aaPredicted RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 RDH11Q8TC12 318 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 RXFP4Q8TDU9 374 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 TM9SF4Q92544 642 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 TM4SF18Q96CE8 201 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 CAPNS2Q96L46 248 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 CXorf58Q96LI9 332 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 NOL4LQ96MY1 436 aaPredicted RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 RDH12Q96NR8 316 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 SLC46A1Q96NT5 459 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 TEAD3Q99594 435 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 PRRT1Q99946 306 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 MESP1Q9BRJ9 268 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 PCGF1Q9BSM1 259 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 SLC29A3Q9BZD2 475 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 ULBP2Q9BZM5 246 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 ENKD1Q9H0I2 346 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 ZNF385DQ9H6B1 395 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 BCAS3Q9H6U6 928 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 THSD1Q9NS62 852 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 ZNF282Q9UDV7 671 aaPredicted RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 SLCO1B1Q9Y6L6 691 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 PHIPQ8WWQ0 1821 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 A0A0U1RQF3 1178 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 SMCO3A2RU48 225 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 OR6C68A6NDL8 312 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 NPIPB11E5RHQ5 1161 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 PDXKO00764 312 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 AZIN1O14977 448 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 ORC5O43913 435 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 CST4P01036 141 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 ELAVL4P26378 380 aaKnown RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 RBMS1P29558 406 aaKnown RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 SSTR2P30874 369 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 GDNFP39905 211 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 IDH3GP51553 393 aaPredicted RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 ART1P52961 327 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 LSM3P62310 102 aaKnown RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 FKBP1BP68106 108 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 ROM1Q03395 351 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 LGALSLQ3ZCW2 172 aaPredicted RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 C6orf141Q5SZD1 244 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 ULK3Q6PHR2 472 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 MRPL52Q86TS9 123 aaKnown RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 SLC5A8Q8N695 610 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 DUSP18Q8NEJ0 188 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 SEMA6DQ8NFY4 1073 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 OR2D3Q8NGH3 330 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 OR2V1Q8NHB1 315 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 OR5K1Q8NHB7 308 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 SDR42E1Q8WUS8 393 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 TMEM203Q969S6 136 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 Q96M66 194 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 ZNF75AQ96N20 296 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 ERMAPQ96PL5 475 aaPredicted RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 HIST1H2AAQ96QV6 131 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 TNFRSF13CQ96RJ3 184 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 ATG101Q9BSB4 218 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 C20orf27Q9GZN8 174 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 C11orf54Q9H0W9 315 aaPredicted RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 CACYBPQ9HB71 228 aaKnown RBP4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 SLC6A20Q9NP91 592 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 NECAP2Q9NVZ3 263 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 PLEK2Q9NYT0 353 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 PSORS1C1Q9UIG5 152 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 IRAK3Q9Y616 596 aa4.56□□□□□ -1.68
SPTBN1-206ENST00000602898 CCDC195A0A1B0GUA6 201 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 A6NIZ1 184 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 PPIAL4DF5H284 164 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 NPIPB9F8W1W9 429 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 K7EP13 123 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 DFFAO00273 331 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 SLC16A4O15374 487 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 ICOSLGO75144 302 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 ZMPSTE24O75844 475 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 CYBBP04839 570 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 OR8U8P0C7N1 319 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 RAP2AP10114 183 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 CD8BP10966 210 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 ANXA3P12429 323 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 PGAM1P18669 254 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 FSTP19883 344 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 TACR1P25103 407 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 FASP25445 335 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 DPP4P27487 766 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 PMELP40967 661 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 KIR2DL1P43626 348 aaPredicted RBP4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 BLKP51451 505 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 MTCP1P56278 107 aa4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 EMX1Q04741 257 aaPredicted RBP4.55□□□□□ -1.68
SPTBN1-206ENST00000602898 GABPAQ06546 454 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms