RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 GSTO2Q9H4Y5 243 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 NRIP3Q9NQ35 241 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 CUTCQ9NTM9 273 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 ZNF226Q9NYT6 803 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 WNT16Q9UBV4 365 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 MSRAQ9UJ68 235 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 FOXJ3Q9UPW0 622 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 NEU3Q9UQ49 428 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 OSGIN2Q9Y236 505 aa8.14□□□□□ -1.11
COMMD3-215ENST00000602574 FAM183AA6NL82 134 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 PPP5D1E7EU14 171 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 GFRA2O00451 464 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 CXCR6O00574 342 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 PEX12O00623 359 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 WNT11O96014 354 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 ARG1P05089 322 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 CFHP08603 1231 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 EBLN1P0CF75 366 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 TFPIP10646 304 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 PSMB1P20618 241 aaKnown RBP8.13□□□□□ -1.11
COMMD3-215ENST00000602574 AVPR1BP47901 424 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 ZFP36L2P47974 494 aaKnown RBP8.13□□□□□ -1.11
COMMD3-215ENST00000602574 SULT1A1P50225 295 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 MMP16P51512 607 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 SH3BP2P78314 561 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 SRSF3P84103 164 aaKnown RBP8.13□□□□□ -1.11
COMMD3-215ENST00000602574 KLF9Q13886 244 aaPredicted RBP8.13□□□□□ -1.11
COMMD3-215ENST00000602574 COA6Q5JTJ3 125 aaKnown RBP8.13□□□□□ -1.11
COMMD3-215ENST00000602574 MFSD14BQ5SR56 506 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 C15orf39Q6ZRI6 1047 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 SYT9Q86SS6 491 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 CILP2Q8IUL8 1156 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 MTURNQ8N3F0 131 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 REPS2Q8NFH8 660 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 OR4F15Q8NGB8 312 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 OR4K2Q8NGD2 314 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 OR5W2Q8NH69 310 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 AKR1E2Q96JD6 320 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 ZNF583Q96ND8 569 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 TMEM74Q96NL1 305 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 GPR22Q99680 433 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 RHOFQ9HBH0 211 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 TMEM161AQ9NX61 479 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 UPB1Q9UBR1 384 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 ST3GAL6Q9Y274 331 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 LRRC37AA6NMS7 1700 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 SIP14410 1827 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 TRDV1A0A1B0GX56 115 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 TCRBV5S1A1TA0A578 114 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 FAM220BPB1ANY3 271 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 SOCS6O14544 535 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 HBP1O60381 514 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 TSPAN15O95858 294 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 EFEMP2O95967 443 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 CST4P01036 141 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 AMBPP02760 352 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 CD74P04233 296 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 CD14P08571 375 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 ACHEP22303 614 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 RPS10P46783 165 aaKnown RBP8.13□□□□□ -1.11
COMMD3-215ENST00000602574 PAX5Q02548 391 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 ZNF252P-AS1Q0IIN9 211 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 ITPK1Q13572 414 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 PAGE3Q5JUK9 113 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 GRHL2Q6ISB3 625 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 CLEC18BQ6UXF7 455 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 TMEM144Q7Z5S9 345 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 ZDHHC21Q8IVQ6 265 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 SIAH3Q8IW03 269 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 ARHGAP12Q8IWW6 846 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 OR11G2Q8NGC1 345 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 UBE2FQ969M7 185 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 FAM162AQ96A26 154 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 TMEM159Q96B96 161 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 NTNG2Q96CW9 530 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 ZIC5Q96T25 663 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 COPS8Q99627 209 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 DEFB129Q9H1M3 183 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 HRH4Q9H3N8 390 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 FN3KRPQ9HA64 309 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 CENPMQ9NSP4 180 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 AIG1Q9NVV5 245 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 B3GAT1Q9P2W7 334 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 CLEC4EQ9ULY5 219 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 ENTPD2Q9Y5L3 495 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 TNFRSF18Q9Y5U5 241 aa8.13□□□□□ -1.11
COMMD3-215ENST00000602574 TGIF2-C20orf24A0A0A6YYL0 155 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 UBE2QL1A1L167 161 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 HSPB2A8KAH6 182 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 STK16O75716 305 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 F7P08709 466 aaPredicted RBP8.12□□□□□ -1.11
COMMD3-215ENST00000602574 ELK1P19419 428 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 ZBTB25P24278 435 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 CCKARP32238 428 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 LGALS7P47929 136 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 MTNR1BP49286 362 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 DVL1P1P54792 670 aaPredicted RBP8.12□□□□□ -1.11
COMMD3-215ENST00000602574 SLC25A11Q02978 314 aaKnown RBP8.12□□□□□ -1.11
COMMD3-215ENST00000602574 SRSF4Q08170 494 aaKnown RBP8.12□□□□□ -1.11
COMMD3-215ENST00000602574 TGM3Q08188 693 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms