RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 CYP4V2Q6ZWL3 525 aaPredicted RBP18.86■□□□□ 0.61
UPF1-207ENST00000599848 OR13C2Q8NGS9 318 aa18.86■□□□□ 0.61
UPF1-207ENST00000599848 OR13C9Q8NGT0 318 aa18.86■□□□□ 0.61
UPF1-207ENST00000599848 VAPAQ9P0L0 249 aa18.86■□□□□ 0.61
UPF1-207ENST00000599848 A0A1W2PQL4 384 aaPredicted RBP18.86■□□□□ 0.61
UPF1-207ENST00000599848 SH2D1BO14796 132 aa18.86■□□□□ 0.61
UPF1-207ENST00000599848 GIPRP48546 466 aa18.86■□□□□ 0.61
UPF1-207ENST00000599848 CLPPQ16740 277 aaPredicted RBP18.86■□□□□ 0.61
UPF1-207ENST00000599848 KCNIP4Q6PIL6 250 aa18.86■□□□□ 0.61
UPF1-207ENST00000599848 LAT2Q9GZY6 243 aa18.86■□□□□ 0.61
UPF1-207ENST00000599848 OR51E2Q9H255 320 aa18.86■□□□□ 0.61
UPF1-207ENST00000599848 STT3AP46977 705 aa18.86■□□□□ 0.61
UPF1-207ENST00000599848 UBE2G2P60604 165 aa18.86■□□□□ 0.61
UPF1-207ENST00000599848 SIX1Q15475 284 aaPredicted RBP18.86■□□□□ 0.61
UPF1-207ENST00000599848 CATSPERDQ86XM0 798 aa18.86■□□□□ 0.61
UPF1-207ENST00000599848 SLC39A7Q92504 469 aa18.86■□□□□ 0.61
UPF1-207ENST00000599848 MRGPRX4Q96LA9 322 aa18.86■□□□□ 0.61
UPF1-207ENST00000599848 PCDHGA7Q9Y5G6 932 aa18.86■□□□□ 0.61
UPF1-207ENST00000599848 NID1P14543 1247 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 HMGA1P17096 107 aaKnown RBP18.85■□□□□ 0.61
UPF1-207ENST00000599848 Q499Y3 187 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 EMC4Q5J8M3 183 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 LSRQ86X29 649 aaPredicted RBP18.85■□□□□ 0.61
UPF1-207ENST00000599848 C12orf45Q8N5I9 185 aaPredicted RBP18.85■□□□□ 0.61
UPF1-207ENST00000599848 ZBTB8BQ8NAP8 495 aaPredicted RBP18.85■□□□□ 0.61
UPF1-207ENST00000599848 TM4SF18Q96CE8 201 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 C19orf43Q9BQ61 176 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 SLC25A18Q9H1K4 315 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 M0R1B8 84 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 ZNF254O75437 659 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 LGI1O95970 557 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 CHATP28329 748 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 JMJD6Q6NYC1 403 aaPredicted RBP18.85■□□□□ 0.61
UPF1-207ENST00000599848 ZNF529Q6P280 563 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 MARCH3Q86UD3 253 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 RNF170Q96K19 258 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 SLC35E1Q96K37 410 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 CMTM3Q96MX0 182 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 OR2A14Q96R47 310 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 KCNJ16Q9NPI9 418 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 LUZP4Q9P127 313 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 PIGLQ9Y2B2 252 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 CBR3O75828 277 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 RAB4AP20338 218 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 PCMT1P22061 227 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 ZNF573Q86YE8 665 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 TEX29Q8N6K0 151 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 MRPL15Q9P015 296 aaKnown RBP18.85■□□□□ 0.61
UPF1-207ENST00000599848 F10P00742 488 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 NFYBP25208 207 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 RPL27P61353 136 aaKnown RBP18.85■□□□□ 0.61
UPF1-207ENST00000599848 PEA15Q15121 130 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 GCNT2Q8N0V5 402 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 LYSMD1Q96S90 227 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 OR51B4Q9Y5P0 310 aa18.85■□□□□ 0.61
UPF1-207ENST00000599848 OR8G3PP0DMU2 310 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 GLB1L2Q8IW92 636 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 OR6V1Q8N148 313 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 OR10X1Q8NGY0 326 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 FBXO27Q8NI29 283 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 BIRC8Q96P09 236 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 GINS3Q9BRX5 216 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 DAPP1Q9UN19 280 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 C19orf53Q9UNZ5 99 aaPredicted RBP18.84■□□□□ 0.61
UPF1-207ENST00000599848 ETV7Q9Y603 341 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 LGALS8O00214 317 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 ATP6V1G1O75348 118 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 GRPP07492 148 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 CHRM2P08172 466 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 SLC2A1P11166 492 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 BMP1P13497 986 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 ANXA7P20073 488 aaKnown RBP18.84■□□□□ 0.61
UPF1-207ENST00000599848 RAB6CQ53S08 254 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 Q6ZTK2 550 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 PFDN5Q99471 154 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 RAB6CQ9H0N0 254 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 NOX4Q9NPH5 578 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 PRICKLE3O43900 615 aaPredicted RBP18.84■□□□□ 0.61
UPF1-207ENST00000599848 CR2P20023 1033 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 ZNF679Q8IYX0 411 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 ELP4Q96EB1 424 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 CCDC88AQ3V6T2 1871 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 ST8SIA5O15466 376 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 KLKB1P03952 638 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 DLX5P56178 289 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 SPEM2Q0P670 501 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 SQSTM1Q13501 440 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 SNTB1Q13884 538 aaKnown RBP18.84■□□□□ 0.61
UPF1-207ENST00000599848 C1orf210Q8IVY1 113 aa18.84■□□□□ 0.61
UPF1-207ENST00000599848 MYEF2Q9P2K5 600 aaKnown RBP18.84■□□□□ 0.61
UPF1-207ENST00000599848 CD82P27701 267 aa18.83■□□□□ 0.61
UPF1-207ENST00000599848 BLVRBP30043 206 aaPredicted RBP18.83■□□□□ 0.61
UPF1-207ENST00000599848 CDK5R2Q13319 367 aa18.83■□□□□ 0.61
UPF1-207ENST00000599848 TMPRSS7Q7RTY8 843 aa18.83■□□□□ 0.61
UPF1-207ENST00000599848 PIWIL3Q7Z3Z3 882 aaKnown RBP18.83■□□□□ 0.61
UPF1-207ENST00000599848 YRDCQ86U90 279 aaKnown RBP18.83■□□□□ 0.61
UPF1-207ENST00000599848 ZNF419Q96HQ0 510 aaPredicted RBP18.83■□□□□ 0.61
UPF1-207ENST00000599848 FAM173AQ9BQD7 235 aa18.83■□□□□ 0.61
UPF1-207ENST00000599848 CRLF2Q9HC73 371 aa18.83■□□□□ 0.61
UPF1-207ENST00000599848 HEYLQ9NQ87 328 aaPredicted RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms