RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 BIVMQ86UB2 503 aa12.37□□□□□ -0.43
LIG1-218ENST00000599322 IL17RDQ8NFM7 739 aa12.37□□□□□ -0.43
LIG1-218ENST00000599322 LILRB1Q8NHL6 650 aaPredicted RBP12.37□□□□□ -0.43
LIG1-218ENST00000599322 NEUROG1Q92886 237 aa12.37□□□□□ -0.43
LIG1-218ENST00000599322 ZNF566Q969W8 418 aa12.37□□□□□ -0.43
LIG1-218ENST00000599322 PRRC1Q96M27 445 aa12.37□□□□□ -0.43
LIG1-218ENST00000599322 Q96MF0 132 aa12.37□□□□□ -0.43
LIG1-218ENST00000599322 SLC38A2Q96QD8 506 aa12.37□□□□□ -0.43
LIG1-218ENST00000599322 GRIP2Q9C0E4 1043 aa12.37□□□□□ -0.43
LIG1-218ENST00000599322 CBLN4Q9NTU7 201 aa12.37□□□□□ -0.43
LIG1-218ENST00000599322 MED29Q9NX70 200 aa12.37□□□□□ -0.43
LIG1-218ENST00000599322 DYNC1I1O14576 645 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 OR7A10O76100 309 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 FARS2O95363 451 aaKnown RBP12.36□□□□□ -0.43
LIG1-218ENST00000599322 HPRP00739 348 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 IGF2P01344 180 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 DANCRP0C864 163 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 HLA-DOBP13765 273 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 APOBEC3AP31941 199 aaPredicted RBP12.36□□□□□ -0.43
LIG1-218ENST00000599322 TTKP33981 857 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 DAP3P51398 398 aaKnown RBP12.36□□□□□ -0.43
LIG1-218ENST00000599322 LGALS3BPQ08380 585 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 TRAM2Q15035 370 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 ZNF813Q6ZN06 617 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 TREML1Q86YW5 311 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 TMEM123Q8N131 208 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 MUC15Q8N387 334 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 FAM169BQ8N8A8 192 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 OR4F15Q8NGB8 312 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 OR6X1Q8NH79 312 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 TXNDC15Q96J42 360 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 ZNF426Q9BUY5 554 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 KATNB1Q9BVA0 655 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 MYLK2Q9H1R3 596 aa12.36□□□□□ -0.43
LIG1-218ENST00000599322 FBXO9Q9UK97 447 aaPredicted RBP12.36□□□□□ -0.43
LIG1-218ENST00000599322 E7EQL1 145 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 NME4O00746 187 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 LYPD3O95274 346 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 SERPINA1P01009 418 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 IGHG1P01857 330 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 THY1P04216 161 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 SOD3P08294 240 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 INHBBP09529 407 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 CD79AP11912 226 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 CBR1P16152 277 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 ZNF84P51523 738 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 CRYBA2P53672 197 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 CLRN1P58418 232 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 KRT72Q14CN4 511 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 RAB35Q15286 201 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 C16orf89Q6UX73 402 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 WDR88Q6ZMY6 472 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 CBLL1Q75N03 491 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 LSRQ86X29 649 aaPredicted RBP12.35□□□□□ -0.43
LIG1-218ENST00000599322 NKAIN4Q8IVV8 208 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 TMEM255BQ8WV15 326 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 SLC25A44Q96H78 314 aaPredicted RBP12.35□□□□□ -0.43
LIG1-218ENST00000599322 PRSS27Q9BQR3 290 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 TRAF4Q9BUZ4 470 aaPredicted RBP12.35□□□□□ -0.43
LIG1-218ENST00000599322 KCNN2Q9H2S1 579 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 KRCC1Q9NPI7 259 aaPredicted RBP12.35□□□□□ -0.43
LIG1-218ENST00000599322 INIPQ9NRY2 104 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 TAS2R5Q9NYW4 299 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 FBXL3Q9UKT7 428 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 SAMD4AQ9UPU9 718 aaKnown RBP12.35□□□□□ -0.43
LIG1-218ENST00000599322 MOKQ9UQ07 419 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 SPEF1Q9Y4P9 236 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 ROS1P08922 2347 aa12.35□□□□□ -0.43
LIG1-218ENST00000599322 DNHD1Q96M86 4753 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 OVOL3O00110 214 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 RAB36O95755 333 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 ASAH2BP0C7U1 165 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 SAGP10523 405 aaPredicted RBP12.34□□□□□ -0.43
LIG1-218ENST00000599322 IFI30P13284 250 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 CDKN1AP38936 164 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 GUCA1AP43080 201 aaPredicted RBP12.34□□□□□ -0.43
LIG1-218ENST00000599322 NPRL3Q12980 569 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 CLEC12BQ2HXU8 276 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 PGGHGQ32M88 737 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 ANKDD1AQ495B1 522 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 GLYATQ6IB77 296 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 ZNF730Q6ZMV8 503 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 LINGO2Q7L985 606 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 PIWIL3Q7Z3Z3 882 aaKnown RBP12.34□□□□□ -0.43
LIG1-218ENST00000599322 DTX2Q86UW9 622 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 RNF113BQ8IZP6 322 aaKnown RBP12.34□□□□□ -0.43
LIG1-218ENST00000599322 OFCC1Q8IZS5 231 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 LRRC17Q8N6Y2 441 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 HSH2DQ96JZ2 352 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 FOXB1Q99853 325 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 DENND2DQ9H6A0 471 aaPredicted RBP12.34□□□□□ -0.43
LIG1-218ENST00000599322 MEPEQ9NQ76 525 aaPredicted RBP12.34□□□□□ -0.43
LIG1-218ENST00000599322 GLTPQ9NZD2 209 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 TAGLN3Q9UI15 199 aa12.34□□□□□ -0.43
LIG1-218ENST00000599322 IGHV1-18A0A0C4DH31 117 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 CENPBD1B2RD01 187 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 ATP6V1G2-DDX39BF2Z307 99 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 H7C1Q1 480 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 MGRN1O60291 552 aa12.33□□□□□ -0.44
LIG1-218ENST00000599322 UBL3O95164 117 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms