RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	TCN1	P20061	433 aa	Predicted RBP	9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	NR4A1	P22736	598 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	ALDH3B1	P43353	468 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	PTDSS1	P48651	473 aa	Known RBP	9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	MRPL19	P49406	292 aa	Known RBP	9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	CDH12	P55289	794 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	PUDP	Q08623	228 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	PMS2P3	Q13401	168 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	SQLE	Q14534	574 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	MAD2L1BP	Q15013	274 aa	Predicted RBP	9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	LRP11	Q86VZ4	500 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	CARM1	Q86X55	608 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	CCDC36	Q8IYA8	594 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	SCAI	Q8N9R8	606 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	LINC01356	Q8N9X3	169 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	SMYD1	Q8NB12	490 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	IL17RD	Q8NFM7	739 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	OR6N1	Q8NGY5	312 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	MRPL24	Q96A35	216 aa	Known RBP	9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	ZNF75A	Q96N20	296 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	EPYC	Q99645	322 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	SPATA5L1	Q9BVQ7	753 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	TMEM27	Q9HBJ8	222 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	SLCO1B3	Q9NPD5	702 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	B3GAT2	Q9NPZ5	323 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	MRPL39	Q9NYK5	338 aa	Known RBP	9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	ZNF224	Q9NZL3	707 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	MYEF2	Q9P2K5	600 aa	Known RBP	9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	SLC13A4	Q9UKG4	626 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	POFUT2	Q9Y2G5	429 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	CORIN	Q9Y5Q5	1042 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	NOX1	Q9Y5S8	564 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	PRORSD1P	A6NEY8	169 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	ZNF726	A6NNF4	738 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	C11orf98	E9PRG8	122 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776		M0R233	179 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	PLPP3	O14495	311 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	SYNGR3	O43761	229 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	PATE4	P0C8F1	98 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	ZNF35	P13682	527 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	PPIB	P23284	216 aa	Known RBP	9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	AHCY	P23526	432 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	SLC6A2	P23975	617 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	SRP14	P37108	136 aa	Known RBP	9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	GIPR	P48546	466 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	SEC24C	P53992	1094 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	CDH15	P55291	814 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	TRMT5	Q32P41	509 aa	Known RBP	9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	AGK	Q53H12	422 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	ELFN2	Q5R3F8	820 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	RINL	Q6ZS11	566 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	ZNF627	Q7L945	461 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	ARMC8	Q8IUR7	673 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	OR6S1	Q8NH40	331 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	FGFBP3	Q8TAT2	258 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	HPS1	Q92902	700 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	LRR1	Q96L50	414 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	C7orf26	Q96N11	449 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	ZNF607	Q96SK3	696 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	FOXB1	Q99853	325 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	CPPED1	Q9BRF8	314 aa	Predicted RBP	9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	TMEM43	Q9BTV4	400 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	TMEM38A	Q9H6F2	299 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	NARFL	Q9H6Q4	476 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	REV1	Q9UBZ9	1251 aa		9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	TMEFF2	Q9UIK5	374 aa	Predicted RBP	9.06	□□□□□ -0.96
LSM4-205	ENST00000597776	ZNF500	O60304	480 aa	Predicted RBP	9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	MFN2	O95140	757 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	TGDS	O95455	350 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	RAB36	O95755	333 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	HPX	P02790	462 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	OPN1SW	P03999	348 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	ADORA3	P0DMS8	318 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	ITGA2	P17301	1181 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	GPX2	P18283	190 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	CSNK1A1	P48729	337 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	BID	P55957	195 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	RAB1A	P62820	205 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	RAB39A	Q14964	217 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	NPTX1	Q15818	432 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	GKAP1	Q5VSY0	366 aa	Predicted RBP	9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	LIPN	Q5VXI9	398 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	DLEU7	Q6UYE1	221 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	WDR88	Q6ZMY6	472 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	PXK	Q7Z7A4	578 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	RANBP3L	Q86VV4	465 aa	Predicted RBP	9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	PTOV1	Q86YD1	416 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	ZNF584	Q8IVC4	421 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	HIPK4	Q8NE63	616 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	GPR32P1	Q8NGA4	272 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	MCHR1	Q99705	422 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	LPAR2	Q9HBW0	351 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	SPEF1	Q9Y4P9	236 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	GMEB1	Q9Y692	573 aa		9.05	□□□□□ -0.96
LSM4-205	ENST00000597776	CPSF4L	A6NMK7	179 aa	Known RBP	9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	EVPLL	A8MZ36	301 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	KPNA4	O00629	521 aa	Predicted RBP	9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	WNT9B	O14905	357 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	TCF21	O43680	179 aa		9.04	□□□□□ -0.96

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