RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 PMF1-BGLAPU3KQ54 211 aa13.18□□□□□ -0.3
TGFB1-202ENST00000597453 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.17□□□□□ -0.34e-10■■■□□ 15.2
TGFB1-202ENST00000597453 A0A087WUJ7 227 aa13.17□□□□□ -0.3
TGFB1-202ENST00000597453 M0R082 166 aa13.17□□□□□ -0.3
TGFB1-202ENST00000597453 F12P00748 615 aaPredicted RBP13.17□□□□□ -0.3
TGFB1-202ENST00000597453 CECR9P0C854 216 aa13.17□□□□□ -0.3
TGFB1-202ENST00000597453 ZNF43P17038 809 aa13.17□□□□□ -0.3
TGFB1-202ENST00000597453 GTF2E2P29084 291 aaKnown RBP13.17□□□□□ -0.3
TGFB1-202ENST00000597453 CALCRP30988 508 aa13.17□□□□□ -0.3
TGFB1-202ENST00000597453 ARF1P84077 181 aaKnown RBP13.17□□□□□ -0.3
TGFB1-202ENST00000597453 NAAAQ02083 359 aa13.17□□□□□ -0.3
TGFB1-202ENST00000597453 CHRFAM7AQ494W8 412 aa13.17□□□□□ -0.3
TGFB1-202ENST00000597453 CYBRD1Q53TN4 286 aa13.17□□□□□ -0.3
TGFB1-202ENST00000597453 ENTPD8Q5MY95 495 aa13.17□□□□□ -0.3
TGFB1-202ENST00000597453 ANKRD16Q6P6B7 361 aa13.17□□□□□ -0.3
TGFB1-202ENST00000597453 CARM1Q86X55 608 aa13.17□□□□□ -0.3
TGFB1-202ENST00000597453 PGAM4Q8N0Y7 254 aa13.17□□□□□ -0.3
TGFB1-202ENST00000597453 SPATA3Q8NHX4 192 aa13.17□□□□□ -0.3
TGFB1-202ENST00000597453 ZNF417Q8TAU3 575 aa13.17□□□□□ -0.3
TGFB1-202ENST00000597453 MAGEE2Q8TD90 523 aaPredicted RBP13.17□□□□□ -0.3
TGFB1-202ENST00000597453 ZNF837Q96EG3 531 aaPredicted RBP13.17□□□□□ -0.3
TGFB1-202ENST00000597453 ZNF587Q96SQ5 575 aaPredicted RBP13.17□□□□□ -0.3
TGFB1-202ENST00000597453 KATNB1Q9BVA0 655 aa13.17□□□□□ -0.3
TGFB1-202ENST00000597453 CA10Q9NS85 328 aa13.17□□□□□ -0.3
TGFB1-202ENST00000597453 NDE1Q9NXR1 346 aa13.17□□□□□ -0.3
TGFB1-202ENST00000597453 ZNF503-AS2A6NEH8 195 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 VWC2LB2RUY7 222 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 CXCR6O00574 342 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 GSTA4O15217 222 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 CHP2O43745 196 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 IGLV1-44P01699 117 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 CRYAAP02489 173 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 CELA3BP08861 270 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 CSF3P09919 207 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 IGHV4-31P0DP07 118 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 ZNF16P17020 682 aaPredicted RBP13.16□□□□□ -0.3
TGFB1-202ENST00000597453 CBLP22681 906 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 GRPRP30550 384 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 SERPINF1P36955 418 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 MNAT1P51948 309 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 CDH12P55289 794 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 SH3BGRP55822 239 aaPredicted RBP13.16□□□□□ -0.3
TGFB1-202ENST00000597453 SNRPD2P62316 118 aaKnown RBP13.16□□□□□ -0.3
TGFB1-202ENST00000597453 SELENOWP63302 87 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 ADIPOQQ15848 244 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 FAM69AQ5T7M9 428 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 PODNL1Q6PEZ8 512 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 VHLLQ6RSH7 139 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 RBM45Q8IUH3 476 aaKnown RBP13.16□□□□□ -0.3
TGFB1-202ENST00000597453 ADAMTS16Q8TE57 1224 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 OXGR1Q96P68 337 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 KCNS3Q9BQ31 491 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 TMEM43Q9BTV4 400 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 POLR2J2Q9GZM3 115 aaKnown RBP13.16□□□□□ -0.3
TGFB1-202ENST00000597453 POLR2J3Q9H1A7 115 aaKnown RBP13.16□□□□□ -0.3
TGFB1-202ENST00000597453 GPR35Q9HC97 309 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 ADA2Q9NZK5 511 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 SH3GLB1Q9Y371 365 aa13.16□□□□□ -0.3
TGFB1-202ENST00000597453 TRAV36DV7A0A075B6V5 113 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 TRAPPC13A5PLN9 417 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 CPSF4LA6NMK7 179 aaKnown RBP13.15□□□□□ -0.3
TGFB1-202ENST00000597453 RPL36A-HNRNPH2H7BZ11 118 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 TRAF3IP2O43734 574 aaPredicted RBP13.15□□□□□ -0.3
TGFB1-202ENST00000597453 OR2T1O43869 369 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 SLC43A1O75387 559 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 SEC14L2O76054 403 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 HPRP00739 348 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 IGKV3-15P01624 115 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 OR4A8P0C604 315 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 TNFRSF1BP20333 461 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 USF1P22415 310 aaPredicted RBP13.15□□□□□ -0.3
TGFB1-202ENST00000597453 HGFACQ04756 655 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 C1DQ13901 141 aaKnown RBP13.15□□□□□ -0.3
TGFB1-202ENST00000597453 CEACAM16Q2WEN9 425 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 C3orf36Q3SXR2 165 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 PHYHD1Q5SRE7 291 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 C16orf89Q6UX73 402 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 TMEM123Q8N131 208 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 OR6S1Q8NH40 331 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 RNF217Q8TC41 542 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 LZICQ8WZA0 190 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 OR2M2Q96R28 347 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 KCNK17Q96T54 332 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 EPYCQ99645 322 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 VRK1Q99986 396 aaPredicted RBP13.15□□□□□ -0.3
TGFB1-202ENST00000597453 CRLF2Q9HC73 371 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 FKBP7Q9Y680 259 aa13.15□□□□□ -0.3
TGFB1-202ENST00000597453 B9A039 149 aa13.14□□□□□ -0.31
TGFB1-202ENST00000597453 LYPD3O95274 346 aa13.14□□□□□ -0.31
TGFB1-202ENST00000597453 IFNA2P01563 188 aa13.14□□□□□ -0.31
TGFB1-202ENST00000597453 THY1P04216 161 aa13.14□□□□□ -0.31
TGFB1-202ENST00000597453 HLA-DOBP13765 273 aa13.14□□□□□ -0.31
TGFB1-202ENST00000597453 HSD17B1P14061 328 aa13.14□□□□□ -0.31
TGFB1-202ENST00000597453 CBR1P16152 277 aa13.14□□□□□ -0.31
TGFB1-202ENST00000597453 PDLIM4P50479 330 aa13.14□□□□□ -0.31
TGFB1-202ENST00000597453 MXRA7P84157 204 aa13.14□□□□□ -0.31
TGFB1-202ENST00000597453 IL1RL1Q01638 556 aa13.14□□□□□ -0.31
TGFB1-202ENST00000597453 GGTLC2Q14390 218 aa13.14□□□□□ -0.31
TGFB1-202ENST00000597453 EFNB3Q15768 340 aa13.14□□□□□ -0.31
TGFB1-202ENST00000597453 FXNQ16595 210 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms