RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 AGFG1P52594 562 aaKnown RBP10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 CTXN1P60606 82 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 CDC42P60953 191 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 TOP3AQ13472 1001 aaPredicted RBP10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 C1DQ13901 141 aaKnown RBP10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 GINS1Q14691 196 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 PON3Q15166 354 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 PTGES3Q15185 160 aaKnown RBP10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 PGGHGQ32M88 737 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 C6orf52Q5T4I8 152 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 CASP12Q6UXS9 341 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 DPY19L2P2Q6ZN68 376 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 Q6ZPB1 254 aaPredicted RBP10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 FCRLAQ7L513 359 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 HDDC2Q7Z4H3 204 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 P4HA3Q7Z4N8 544 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 IGFN1Q86VF2 1251 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 UEVLDQ8IX04 471 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 PHC2Q8IXK0 858 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 IQCF1Q8N6M8 205 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 OR8D4Q8NGM9 314 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 OR5M9Q8NGP3 310 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 ZNF845Q96IR2 970 aaPredicted RBP10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 PLEKHA8Q96JA3 519 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 SLC38A2Q96QD8 506 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 UCN2Q96RP3 112 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 GPX7Q96SL4 187 aaPredicted RBP10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 APOL4Q9BPW4 351 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 TUBA1CQ9BQE3 449 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 KATNB1Q9BVA0 655 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 GRIP2Q9C0E4 1043 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 SLC25A19Q9HC21 320 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 NPDC1Q9NQX5 325 aaPredicted RBP10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 FAM118AQ9NWS6 357 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 IMPAD1Q9NX62 359 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 RAB26Q9ULW5 256 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 ZNF175Q9Y473 711 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 HIVEP2P31629 2446 aa10.73□□□□□ -0.69
SHKBP1-213ENST00000597325 LOC100130705A0A1B0GUX0 176 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 SLC22A20A6NK97 555 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 ZAR1LA6NP61 321 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 CLCA1A8K7I4 914 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 DLGAP1O14490 977 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 SMAD9O15198 467 aaKnown RBP10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 PPP1R3DO95685 299 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 PLGP00747 810 aaPredicted RBP10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 IFNGP01579 166 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 HMGN1P05114 100 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 F13BP05160 661 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 TPOP07202 933 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 CD14P08571 375 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 TSPAN19P0C672 248 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 ZNF43P17038 809 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 GRK5P34947 590 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 POLR2IP36954 125 aaKnown RBP10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 CASP6P55212 293 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 FXYD6P3P58550 94 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 H3F3AP84243 136 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 POU3F1Q03052 451 aaPredicted RBP10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 TFF3Q07654 80 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 ZP4Q12836 540 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 IL18R1Q13478 541 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 FHL1Q13642 323 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 KEAP1Q14145 624 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 SLX4IPQ5VYV7 408 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 ABLIM2Q6H8Q1 611 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 ZNF585AQ6P3V2 769 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 THSD4Q6ZMP0 1018 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 PXKQ7Z7A4 578 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 DMRTC2Q8IXT2 367 aaPredicted RBP10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 DEPDC4Q8N2C3 294 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 SETD9Q8NE22 299 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 FAM81AQ8TBF8 368 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 ZPLD1Q8TCW7 415 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 ROBO4Q8WZ75 1007 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 OXGR1Q96P68 337 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 ERMAPQ96PL5 475 aaPredicted RBP10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 PITX2Q99697 317 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 SF3B5Q9BWJ5 86 aaKnown RBP10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 TAS2R5Q9NYW4 299 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 EMC3Q9P0I2 261 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 KLHL13Q9P2N7 655 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 GRHPRQ9UBQ7 328 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 NOX1Q9Y5S8 564 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 MEGF8Q7Z7M0 2845 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 GTF3C1Q12789 2109 aa10.72□□□□□ -0.69
SHKBP1-213ENST00000597325 RIIAD1A6NNX1 92 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 AHRRA9YTQ3 701 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 ZNF814B7Z6K7 855 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 MS4A18H0YCH9 400 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 BHLHE40O14503 412 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 XKRYO14609 159 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 PRRG2O14669 202 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 SLC16A6O15403 523 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 AKAP8O43823 692 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 IDH3BO43837 385 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 CYTIPO60759 359 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 WDR1O75083 606 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 LY6G6DO95868 133 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 APEHP13798 732 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms