RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 MESTQ5EB52 335 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 HIST2H2BCQ6DN03 193 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 ZFP1Q6P2D0 407 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 NIPAL3Q6P499 406 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 ZNF620Q6ZNG0 422 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 RASSF6Q6ZTQ3 369 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 RRM2BQ7LG56 351 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 UEVLDQ8IX04 471 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 LINC00471Q8N535 108 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 ZNF433Q8N7K0 673 aaPredicted RBP9.31□□□□□ -0.92
LIG1-210ENST00000596332 CLDN22Q8N7P3 220 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 ANKK1Q8NFD2 765 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 OR5K1Q8NHB7 308 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 HDAC2Q92769 488 aaKnown RBP9.31□□□□□ -0.92
LIG1-210ENST00000596332 RNASE6Q93091 150 aaKnown RBP9.31□□□□□ -0.92
LIG1-210ENST00000596332 GTPBP3Q969Y2 492 aaKnown RBP9.31□□□□□ -0.92
LIG1-210ENST00000596332 CENPNQ96H22 339 aaPredicted RBP9.31□□□□□ -0.92
LIG1-210ENST00000596332 LRR1Q96L50 414 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 SAMD8Q96LT4 415 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 Q96M85 177 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 RBM24Q9BX46 236 aaKnown RBP9.31□□□□□ -0.92
LIG1-210ENST00000596332 LINC00470Q9BZP3 86 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 GABARAPL1Q9H0R8 117 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 SEMA6AQ9H2E6 1030 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 OR52D1Q9H346 318 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 TXNIPQ9H3M7 391 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 NELFAQ9H3P2 528 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 YY1AP1Q9H869 796 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 SMURF2Q9HAU4 748 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 INIPQ9NRY2 104 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 PARPBPQ9NWS1 579 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 EMC3Q9P0I2 261 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 TMCC3Q9ULS5 477 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 MGAT4BQ9UQ53 548 aa9.31□□□□□ -0.92
LIG1-210ENST00000596332 ICE1Q9Y2F5 2266 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 CACNA1CQ13936 2221 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 A1L4Q6 167 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 EEF1E1-BLOC1S5C9J1V9 151 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 EEF1E1O43324 174 aaKnown RBP9.3□□□□□ -0.92
LIG1-210ENST00000596332 MITFO75030 526 aaPredicted RBP9.3□□□□□ -0.92
LIG1-210ENST00000596332 TRMUO75648 421 aaKnown RBP9.3□□□□□ -0.92
LIG1-210ENST00000596332 NDUFB2O95178 105 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 CNOT4O95628 575 aaKnown RBP9.3□□□□□ -0.92
LIG1-210ENST00000596332 ADAP00813 363 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 HIST1H2ABP04908 130 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 CD14P08571 375 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 PSMB1P20618 241 aaKnown RBP9.3□□□□□ -0.92
LIG1-210ENST00000596332 GTF2E2P29084 291 aaKnown RBP9.3□□□□□ -0.92
LIG1-210ENST00000596332 EPHA2P29317 976 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 CD79BP40259 229 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 CDKN2AP42771 156 aaKnown RBP9.3□□□□□ -0.92
LIG1-210ENST00000596332 PRPS1P60891 318 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 RPL27P61353 136 aaKnown RBP9.3□□□□□ -0.92
LIG1-210ENST00000596332 PPP2R2BQ00005 443 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 CAMK2DQ13557 499 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 C1DQ13901 141 aaKnown RBP9.3□□□□□ -0.92
LIG1-210ENST00000596332 SFRP5Q5T4F7 317 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 KDM4DQ6B0I6 523 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 SMARCD3Q6STE5 483 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 CASP12Q6UXS9 341 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 PTCHD4Q6ZW05 846 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 HIST3H2AQ7L7L0 130 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 CXorf67Q86X51 503 aaPredicted RBP9.3□□□□□ -0.92
LIG1-210ENST00000596332 CDK20Q8IZL9 346 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 ARIH2OSQ8N7S6 290 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 OR4Q3Q8NH05 313 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 HIST1H2ACQ93077 130 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 APH1AQ96BI3 265 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 SLC25A44Q96H78 314 aaPredicted RBP9.3□□□□□ -0.92
LIG1-210ENST00000596332 SLC29A1Q99808 456 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 KATNB1Q9BVA0 655 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 SLCO5A1Q9H2Y9 848 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 GPR35Q9HC97 309 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 ELOVL5Q9NYP7 299 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 C6orf203Q9P0P8 240 aaPredicted RBP9.3□□□□□ -0.92
LIG1-210ENST00000596332 FBN2P35556 2912 aa9.3□□□□□ -0.92
LIG1-210ENST00000596332 PTPN13Q12923 2485 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 BAHCC1Q9P281 2608 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 HECTD1Q9ULT8 2610 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 ZNF503-AS2A6NEH8 195 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 DLGAP1O14490 977 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 GNGT2O14610 69 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 ARPC3O15145 178 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 SERPINI2O75830 405 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 OR6A2O95222 327 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 BCL10O95999 233 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 APEHP13798 732 aaKnown RBP9.29□□□□□ -0.92
LIG1-210ENST00000596332 ACADSP16219 412 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 UGT2B10P36537 528 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 POLR2IP36954 125 aaKnown RBP9.29□□□□□ -0.92
LIG1-210ENST00000596332 EFNB1P98172 346 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 FAPQ12884 760 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 COX10Q12887 443 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 GABRA6Q16445 453 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 SP5Q6BEB4 398 aaPredicted RBP9.29□□□□□ -0.92
LIG1-210ENST00000596332 ACSM5Q6NUN0 579 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 SLC25A47Q6Q0C1 308 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 DPY19L2P2Q6ZN68 376 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 BEND4Q6ZU67 534 aa9.29□□□□□ -0.92
LIG1-210ENST00000596332 ZNF627Q7L945 461 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms