RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 CADP27708 2225 aa15.48■□□□□ 0.07
SHKBP1-204ENST00000594862 A0A096LPE4 126 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 IGHV1-18A0A0C4DH31 117 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 A0A1W2PPZ6 126 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 CENPBD1B2RD01 187 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 C11orf98E9PRG8 122 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 ATP6V1G2-DDX39BF2Z307 99 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 H7C1Q1 480 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 CXCR6O00574 342 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 NME4O00746 187 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 SERPINI2O75830 405 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 IGKV3-15P01624 115 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 IGLV1-44P01699 117 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 IFNGR1P15260 489 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 CBR1P16152 277 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 APOBEC3AP31941 199 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 OR1E2P47887 323 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 SEC24CP53992 1094 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 BIDP55957 195 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 PIN1Q13526 163 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 CARD17Q5XLA6 110 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 NHLRC1Q6VVB1 395 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 TSPYL5Q86VY4 417 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 TREML1Q86YW5 311 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 OR4F15Q8NGB8 312 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 LIPHQ8WWY8 451 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 ZNF566Q969W8 418 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 SGTBQ96EQ0 304 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 SLC25A44Q96H78 314 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 KCTD14Q9BQ13 255 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 EMC6Q9BV81 110 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 DENND2DQ9H6A0 471 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 SPAG4Q9NPE6 437 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 ABCD2Q9UBJ2 740 aa15.47■□□□□ 0.07
SHKBP1-204ENST00000594862 A0A1W2PRG6 482 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 VSTM5A8MXK1 200 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 GMNNO75496 209 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 PDE5AO76074 875 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 OR7A10O76100 309 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 CD8AP01732 235 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 NR2C1P13056 603 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 TNFRSF1BP20333 461 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 DRD4P21917 467 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 CDKN1AP38936 164 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 GSK3BP49841 420 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 DAP3P51398 398 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 CAMK2DQ13557 499 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 IFI44LQ53G44 452 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 B3GLCTQ6Y288 498 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 SLC46A3Q7Z3Q1 461 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 OFCC1Q8IZS5 231 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 TMEM255BQ8WV15 326 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 TXNDC15Q96J42 360 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 MEPEQ9NQ76 525 aaPredicted RBP15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 TAS2R5Q9NYW4 299 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 RPS6KA6Q9UK32 745 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 MOKQ9UQ07 419 aa15.46■□□□□ 0.07
SHKBP1-204ENST00000594862 NPIPB13A6NJU9 1138 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 NPIPB4C9JG80 1138 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 H7C417 338 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 ZNF682O95780 498 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 BCL10O95999 233 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 IGHG1P01857 330 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 CECR9P0C854 216 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 HOXB4P17483 251 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 CAPZA2P47755 286 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 UGT2B15P54855 530 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 PSME3P61289 254 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 NAAAQ02083 359 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 CLEC12BQ2HXU8 276 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 ANKDD1AQ495B1 522 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 C11orf71Q6IPW1 123 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 ZNF813Q6ZN06 617 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 CBLL1Q75N03 491 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 DPPA2Q7Z7J5 298 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 CYP4Z1Q86W10 505 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 NKAIN4Q8IVV8 208 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 TMEM54Q969K7 222 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 FAM162AQ96A26 154 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 FOXB1Q99853 325 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 FNDC11Q9BVV2 318 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 CACNG6Q9BXT2 260 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 GLTPQ9NZD2 209 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 PMF1-BGLAPU3KQ54 211 aa15.45■□□□□ 0.06
SHKBP1-204ENST00000594862 MCIDASD6RGH6 385 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 BLOC1S5-TXNDC5H3BN57 136 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 MGRN1O60291 552 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 DCTN3O75935 186 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 UBL3O95164 117 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 IGHV4-39P01824 125 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 HEXAP06865 529 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 FUT1P19526 365 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 DSCR9P59020 149 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 GNGT1P63211 74 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 RPL18Q07020 188 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 TRAM2Q15035 370 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 TAF11Q15544 211 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 GSG1Q2KHT4 349 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 CLEC9AQ6UXN8 241 aa15.44■□□□□ 0.06
SHKBP1-204ENST00000594862 FKBP9P1Q75LS8 142 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms