RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SEC14L4Q9UDX3 406 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 TESQ9UGI8 421 aaKnown RBP12.74□□□□□ -0.37
PNKP-202ENST00000593706 USP22Q9UPT9 525 aa12.74□□□□□ -0.37
PNKP-202ENST00000593706 A0A0B4J2E0 115 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 A0A1B0GX12 115 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 RPL36A-HNRNPH2H7BZ11 118 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 AIM2O14862 343 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 LILRA1O75019 489 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 ZNF432O94892 652 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 ADRA2AP08913 450 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 PCMT1P22061 227 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 ARFIP2P53365 341 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 CDH15P55291 814 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 TRIP10Q15642 601 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 NPTX1Q15818 432 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 CYP51A1Q16850 503 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 FAM91A1Q658Y4 838 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 UGT2A3Q6UWM9 527 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 MDP1Q86V88 176 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 CALHM3Q86XJ0 350 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 ARMC8Q8IUR7 673 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 ZNF786Q8N393 782 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 BHLHE22Q8NFJ8 381 aaPredicted RBP12.73□□□□□ -0.37
PNKP-202ENST00000593706 C10orf82Q8WW14 230 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 KTI12Q96EK9 354 aaPredicted RBP12.73□□□□□ -0.37
PNKP-202ENST00000593706 OXGR1Q96P68 337 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 ZNF607Q96SK3 696 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 DOK1Q99704 481 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 ARHGDIGQ99819 225 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 NOX3Q9HBY0 568 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 MRGBPQ9NV56 204 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 ANGPT4Q9Y264 503 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 CMAHPQ9Y471 501 aa12.73□□□□□ -0.37
PNKP-202ENST00000593706 ZNF503-AS2A6NEH8 195 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 ZNF99A8MXY4 864 aaPredicted RBP12.72□□□□□ -0.37
PNKP-202ENST00000593706 M0R082 166 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 M0R233 179 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 M0R3G1 203 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 SERPINB7O75635 380 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 VIMP08670 466 aaKnown RBP12.72□□□□□ -0.37
PNKP-202ENST00000593706 NQO1P15559 274 aaKnown RBP12.72□□□□□ -0.37
PNKP-202ENST00000593706 CD247P20963 164 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 MDH1P40925 334 aaKnown RBP12.72□□□□□ -0.37
PNKP-202ENST00000593706 DUSP7Q16829 419 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 RABL3Q5HYI8 236 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 FAM69AQ5T7M9 428 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 REP15Q6BDI9 236 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 NANOGP8Q6NSW7 305 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 TSPYL5Q86VY4 417 aaPredicted RBP12.72□□□□□ -0.37
PNKP-202ENST00000593706 IL17RDQ8NFM7 739 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 ZNF417Q8TAU3 575 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 DNAJA4Q8WW22 397 aaPredicted RBP12.72□□□□□ -0.37
PNKP-202ENST00000593706 SLC38A4Q969I6 547 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 TAMM41Q96BW9 452 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 ZNF587Q96SQ5 575 aaPredicted RBP12.72□□□□□ -0.37
PNKP-202ENST00000593706 OCEL1Q9H607 264 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 NANOGQ9H9S0 305 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 KLHL14Q9P2G3 628 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 B3GAT1Q9P2W7 334 aa12.72□□□□□ -0.37
PNKP-202ENST00000593706 A0A087WUJ7 227 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 TMEM129A0AVI4 362 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 BBIP1A8MTZ0 92 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 LYNX1G3V0Z9 82 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 OR2T1O43869 369 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 FMO6PO60774 539 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 LYPD3O95274 346 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 NPPAP01160 153 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 OPN1SWP03999 348 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 LYNX1P0DP58 116 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 CD79AP11912 226 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 GRPRP30550 384 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 RGS8P57771 180 aaPredicted RBP12.71□□□□□ -0.37
PNKP-202ENST00000593706 SF3A3Q12874 501 aaKnown RBP eCLIP12.71□□□□□ -0.372e-6■■■■□ 21.6
PNKP-202ENST00000593706 RIN1Q13671 783 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 GSG1Q2KHT4 349 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 ALG10BQ5I7T1 473 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 SWT1Q5T5J6 900 aaKnown RBP12.71□□□□□ -0.37
PNKP-202ENST00000593706 CARD17Q5XLA6 110 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 ULK3Q6PHR2 472 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 C5orf46Q6UWT4 87 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 CCDC80Q76M96 950 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 GLCCI1Q86VQ1 547 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 SNX32Q86XE0 403 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 MEX3DQ86XN8 651 aaKnown RBP12.71□□□□□ -0.37
PNKP-202ENST00000593706 CCDC36Q8IYA8 594 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 SMYD1Q8NB12 490 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 OR8J3Q8NGG0 315 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 OR4D11Q8NGI4 311 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 OR10A6Q8NH74 314 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 TAAR8Q969N4 342 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 LRRC58Q96CX6 371 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 ZNF837Q96EG3 531 aaPredicted RBP12.71□□□□□ -0.37
PNKP-202ENST00000593706 OR2M2Q96R28 347 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 NARFLQ9H6Q4 476 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 EVA1AQ9H8M9 152 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 METRNQ9UJH8 293 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 SPEF1Q9Y4P9 236 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 NOX1Q9Y5S8 564 aa12.71□□□□□ -0.37
PNKP-202ENST00000593706 M0QX08 132 aa12.7□□□□□ -0.38
PNKP-202ENST00000593706 M0R3H8 397 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms