RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 ABRACLQ9P1F3 81 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 ASCC3Q8N3C0 2202 aaKnown RBP17.79■□□□□ 0.44
CLIP3-206ENST00000593074 TECTAO75443 2155 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 TRBV11-1A0A0K0K1C0 115 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 MEIOCA2RUB1 952 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 ANKUB1A6NFN9 424 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 ARHGEF9O43307 516 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 AKR7A3O95154 331 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 ZFPL1O95159 310 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 OR8G3PP0DMU2 310 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 SUMO3P55854 103 aaPredicted RBP17.78■□□□□ 0.44
CLIP3-206ENST00000593074 RPL27P61353 136 aaKnown RBP17.78■□□□□ 0.44
CLIP3-206ENST00000593074 SF3A2Q15428 464 aaKnown RBP17.78■□□□□ 0.44
CLIP3-206ENST00000593074 LPAL2Q16609 132 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 MZT2BQ6NZ67 158 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 CPEB2Q7Z5Q1 589 aaKnown RBP17.78■□□□□ 0.44
CLIP3-206ENST00000593074 PM20D2Q8IYS1 436 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 ST8SIA1Q92185 356 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 CRB3Q9BUF7 120 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 TMEM221A6NGB7 291 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 TVP23AA6NH52 213 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 M0R296 226 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 XKRYO14609 159 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 TFECO14948 347 aaPredicted RBP17.78■□□□□ 0.44
CLIP3-206ENST00000593074 PIN1P1O15428 100 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 LYRM1O43325 122 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 TRIM3O75382 744 aaPredicted RBP17.78■□□□□ 0.44
CLIP3-206ENST00000593074 AHSA1O95433 338 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 FAM157BP0CG42 384 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 PRKAR1AP10644 381 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 PITPNBP48739 271 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 DLX5P56178 289 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 C17orf67Q0P5P2 114 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 ACKR1Q16570 336 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 SYT9Q86SS6 491 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 AGBL5Q8NDL9 886 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 THAP3Q8WTV1 239 aaPredicted RBP17.78■□□□□ 0.44
CLIP3-206ENST00000593074 HSD17B8Q92506 261 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 MAP6Q96JE9 813 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 ADAD1Q96M93 576 aaKnown RBP17.78■□□□□ 0.44
CLIP3-206ENST00000593074 KLHL15Q96M94 604 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 OR11A1Q9GZK7 315 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 TXNIPQ9H3M7 391 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 RNF121Q9H920 327 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 NOX4Q9NPH5 578 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 LAMP5Q9UJQ1 280 aa17.78■□□□□ 0.44
CLIP3-206ENST00000593074 COL6A3P12111 3177 aa17.77■□□□□ 0.44
CLIP3-206ENST00000593074 PRSS37A4D1T9 235 aa17.77■□□□□ 0.44
CLIP3-206ENST00000593074 FTCDNL1E5RQL4 147 aa17.77■□□□□ 0.44
CLIP3-206ENST00000593074 PLPP3O14495 311 aa17.77■□□□□ 0.44
CLIP3-206ENST00000593074 CCNKO75909 580 aa17.77■□□□□ 0.44
CLIP3-206ENST00000593074 NAGAP17050 411 aa17.77■□□□□ 0.44
CLIP3-206ENST00000593074 ALOX5APP20292 161 aa17.77■□□□□ 0.44
CLIP3-206ENST00000593074 EGR3Q06889 387 aa17.77■□□□□ 0.44
CLIP3-206ENST00000593074 LIPNQ5VXI9 398 aa17.77■□□□□ 0.44
CLIP3-206ENST00000593074 TMEM205Q6UW68 189 aa17.77■□□□□ 0.44
CLIP3-206ENST00000593074 DUSP18Q8NEJ0 188 aa17.77■□□□□ 0.44
CLIP3-206ENST00000593074 OR6N2Q8NGY6 317 aa17.77■□□□□ 0.44
CLIP3-206ENST00000593074 OR6F1Q8NGZ6 308 aa17.77■□□□□ 0.44
CLIP3-206ENST00000593074 OR6S1Q8NH40 331 aa17.77■□□□□ 0.44
CLIP3-206ENST00000593074 TRIM63Q969Q1 353 aa17.77■□□□□ 0.44
CLIP3-206ENST00000593074 INTS14Q96SY0 518 aa17.77■□□□□ 0.44
CLIP3-206ENST00000593074 MRPL39Q9NYK5 338 aaKnown RBP17.77■□□□□ 0.44
CLIP3-206ENST00000593074 FKBP7Q9Y680 259 aa17.77■□□□□ 0.44
CLIP3-206ENST00000593074 TMEM14AQ9Y6G1 99 aa17.77■□□□□ 0.44
CLIP3-206ENST00000593074 OR2T1O43869 369 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 KRT8P05787 483 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 TRAPPC2P0DI81 140 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 TRAPPC2BP0DI82 140 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 ZFP36L1Q07352 338 aaKnown RBP17.76■□□□□ 0.43
CLIP3-206ENST00000593074 UBE2J2Q8N2K1 259 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 YIPF7Q8N8F6 280 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 OR5L2Q8NGL0 311 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 OR5H6Q8NGV6 325 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 ATOH1Q92858 354 aaPredicted RBP17.76■□□□□ 0.43
CLIP3-206ENST00000593074 DERL3Q96Q80 235 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 WACQ9BTA9 647 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 VSX1Q9NZR4 365 aaPredicted RBP17.76■□□□□ 0.43
CLIP3-206ENST00000593074 C19orf25Q9UFG5 118 aaPredicted RBP17.76■□□□□ 0.43
CLIP3-206ENST00000593074 HSPB2A8KAH6 182 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 PHYHO14832 338 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 FZD7O75084 574 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 CYC1P08574 325 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 SRMP19623 302 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 AHCYP23526 432 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 TMED10P49755 219 aaKnown RBP17.76■□□□□ 0.43
CLIP3-206ENST00000593074 ALKBH1Q13686 389 aaKnown RBP17.76■□□□□ 0.43
CLIP3-206ENST00000593074 HSPB2Q16082 182 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 PYHIN1Q6K0P9 492 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 MRPL14Q6P1L8 145 aaKnown RBP17.76■□□□□ 0.43
CLIP3-206ENST00000593074 DPY19L4Q7Z388 723 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 ZNF417Q8TAU3 575 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 TTC9Q92623 222 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 FRMD6Q96NE9 622 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 ZNF587Q96SQ5 575 aaPredicted RBP17.76■□□□□ 0.43
CLIP3-206ENST00000593074 SMOC1Q9H4F8 434 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 GALNT9Q9HCQ5 603 aa17.76■□□□□ 0.43
CLIP3-206ENST00000593074 A0A0C4DFX4 3053 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 A0A0B4J293 547 aa17.75■□□□□ 0.43
CLIP3-206ENST00000593074 GDF9O60383 454 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms