RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 CTXN1P60606 82 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 FMODQ06828 376 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 SLC25A35Q3KQZ1 300 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 MESTQ5EB52 335 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 SLC35F1Q5T1Q4 408 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 ACSM5Q6NUN0 579 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 SMARCD3Q6STE5 483 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 ZBTB49Q6ZSB9 765 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 RASSF6Q6ZTQ3 369 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 PTCHD4Q6ZW05 846 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 CREB3L2Q70SY1 520 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 LINGO2Q7L985 606 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 CNEP1R1Q8N9A8 125 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 ADPRHL1Q8NDY3 354 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 MBD3L2Q8NHZ7 208 aaPredicted RBP8.54□□□□□ -1.04
DDX39A-220ENST00000593008 ASB10Q8WXI3 467 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 ZHX1-C8orf76Q96EF9 292 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 ZNF570Q96NI8 536 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 IFT27Q9BW83 186 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 TSSK6Q9BXA6 273 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 POLDIP3Q9BY77 421 aaKnown RBP8.54□□□□□ -1.04
DDX39A-220ENST00000593008 OPN3Q9H1Y3 402 aaPredicted RBP8.54□□□□□ -1.04
DDX39A-220ENST00000593008 TOR3AQ9H497 397 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 PRSS50Q9UI38 385 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 CORINQ9Y5Q5 1042 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 IER3IP1Q9Y5U9 82 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 APCP25054 2843 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 ALPK2Q86TB3 2170 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 TACC2O95359 2948 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 PHF3Q92576 2039 aaKnown RBP8.53□□□□□ -1.04
DDX39A-220ENST00000593008 IGKV3D-15A0A087WSY6 115 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 BHLHE40O14503 412 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 DNPH1O43598 174 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 EIF1BO60739 113 aaKnown RBP8.53□□□□□ -1.04
DDX39A-220ENST00000593008 SS18L1O75177 396 aaPredicted RBP8.53□□□□□ -1.04
DDX39A-220ENST00000593008 NDUFB2O95178 105 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 OR6A2O95222 327 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 HIST1H2ABP04908 130 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 OSMP13725 252 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 ANXA8P13928 327 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 IGFBP2P18065 325 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 CTSSP25774 331 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 IFNGR2P38484 337 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 KIR2DL2P43627 348 aaPredicted RBP8.53□□□□□ -1.04
DDX39A-220ENST00000593008 SLC16A1P53985 500 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 BIDP55957 195 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 MYBPC1Q00872 1141 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 CAMK2DQ13557 499 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 C1DQ13901 141 aaKnown RBP8.53□□□□□ -1.04
DDX39A-220ENST00000593008 GINS1Q14691 196 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 PGGHGQ32M88 737 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 RFX4Q33E94 735 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 ARMC4Q5T2S8 1044 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 TMEM225Q6GV28 225 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 NIPAL3Q6P499 406 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 CASP12Q6UXS9 341 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 CD300LDQ6UXZ3 194 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 SLC35D2Q76EJ3 337 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 HIST3H2AQ7L7L0 130 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 FAM122BQ7Z309 247 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 BCDIN3DQ7Z5W3 292 aaKnown RBP8.53□□□□□ -1.04
DDX39A-220ENST00000593008 BTLAQ7Z6A9 289 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 UEVLDQ8IX04 471 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 CDK20Q8IZL9 346 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 TMEM123Q8N131 208 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 SYT14Q8NB59 555 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 SDR9C7Q8NEX9 313 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 OR4K13Q8NH42 304 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 ZNF519Q8TB69 540 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 HDAC2Q92769 488 aaKnown RBP8.53□□□□□ -1.04
DDX39A-220ENST00000593008 HIST1H2ACQ93077 130 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 WNT2BQ93097 391 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 UBE2FQ969M7 185 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 LRRC46Q96FV0 321 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 FOXN4Q96NZ1 517 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 OXGR1Q96P68 337 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 ALKBH3Q96Q83 286 aaPredicted RBP8.53□□□□□ -1.04
DDX39A-220ENST00000593008 OR2M2Q96R28 347 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 TM9SF2Q99805 663 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 RBM4BQ9BQ04 359 aaKnown RBP8.53□□□□□ -1.04
DDX39A-220ENST00000593008 SPOCK3Q9BQ16 436 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 TACO1Q9BSH4 297 aaKnown RBP8.53□□□□□ -1.04
DDX39A-220ENST00000593008 NAA11Q9BSU3 229 aaPredicted RBP8.53□□□□□ -1.04
DDX39A-220ENST00000593008 C9orf16Q9BUW7 83 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 RBM4Q9BWF3 364 aaKnown RBP8.53□□□□□ -1.04
DDX39A-220ENST00000593008 HCAR1Q9BXC0 346 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 GABARAPL3Q9BY60 117 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 MED20Q9H944 212 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 KRCC1Q9NPI7 259 aaPredicted RBP8.53□□□□□ -1.04
DDX39A-220ENST00000593008 INIPQ9NRY2 104 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 RASD1Q9Y272 281 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 B3GALT5Q9Y2C3 310 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 POFUT2Q9Y2G5 429 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 GPR52Q9Y2T5 361 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 CSMD1Q96PZ7 3565 aa8.53□□□□□ -1.04
DDX39A-220ENST00000593008 ARHGAP21Q5T5U3 1957 aa8.52□□□□□ -1.05
DDX39A-220ENST00000593008 SLC35F4A4IF30 521 aa8.52□□□□□ -1.05
DDX39A-220ENST00000593008 UPK3AO75631 287 aa8.52□□□□□ -1.05
DDX39A-220ENST00000593008 SEC14L2O76054 403 aa8.52□□□□□ -1.05
DDX39A-220ENST00000593008 RCBTB2O95199 551 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms