RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 ZNF600Q6ZNG1 722 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 KANSL1Q7Z3B3 1105 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SPNS2Q8IVW8 549 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 FRMD1Q8N878 549 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ZNF366Q8N895 744 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ZDHHC22Q8N966 263 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 OR5D14Q8NGL3 314 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 OR5H2Q8NGV7 314 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 OR10Z1Q8NGY1 313 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 CASTOR1Q8WTX7 329 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ST8SIA2Q92186 375 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 TMEM106AQ96A25 262 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ARRDC3Q96B67 414 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 HHIPL1Q96JK4 782 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 DCBLD2Q96PD2 775 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 APOOQ9BUR5 198 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ZBP1Q9H171 429 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 C8orf33Q9H7E9 229 aaPredicted RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 MED20Q9H944 212 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SYNPO2LQ9H987 977 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SRA1Q9HD15 236 aaKnown RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 USP36Q9P275 1121 aaKnown RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 MTFP1Q9UDX5 166 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ZNF629Q9UEG4 869 aaPredicted RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 CLEC4EQ9ULY5 219 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 FOXJ3Q9UPW0 622 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SIGLEC7Q9Y286 467 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 KPTNQ9Y664 436 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SERINC4A6NH21 518 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 E9PI62 339 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 MEN1O00255 615 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 TSPAN15O95858 294 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ATF1P18846 271 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ACHEP22303 614 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 CD96P40200 585 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 GLP1RP43220 463 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 RAD52P43351 418 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 HAAOP46952 286 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 PGDP52209 483 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 CXADRP78310 365 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 TLE2Q04725 743 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 GPNMBQ14956 572 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 UBXN2BQ14CS0 331 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 LGALSLQ3ZCW2 172 aaPredicted RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 CHRFAM7AQ494W8 412 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 AKIRIN2Q53H80 203 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 FAM219BQ5XKK7 198 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 FAM180BQ6P0A1 224 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 HIST2H3AQ71DI3 136 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ABI3BPQ7Z7G0 1075 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 HMGN2P46Q86SG4 172 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 MISPQ8IVT2 679 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SLC16A11Q8NCK7 471 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ZBTB44Q8NCP5 570 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 BVESQ8NE79 360 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 LFNGQ8NES3 379 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 DUSP19Q8WTR2 217 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 MYLIPQ8WY64 445 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 DAZLQ92904 295 aaKnown RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 NKD1Q969G9 470 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 FAM3DQ96BQ1 224 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 TMEM41AQ96HV5 264 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 DEFB118Q96PH6 123 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ABHD1Q96SE0 405 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 SYT3Q9BQG1 590 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 ISG20L2Q9H9L3 353 aaKnown RBP3.25□□□□□ -1.89
VMP1-216ENST00000592790 ADGRL4Q9HBW9 690 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 POT1Q9NUX5 634 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 GDE1Q9NZC3 331 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 LUZP4Q9P127 313 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 DAPP1Q9UN19 280 aa3.25□□□□□ -1.89
VMP1-216ENST00000592790 GBF1Q92538 1859 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 TEX13DA0A0J9YY54 714 aaPredicted RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 A0A1W2PQU0 124 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 ZNF705EA8MWA4 302 aaPredicted RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 TGOLN2O43493 480 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 SIGLEC6O43699 453 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 PRAMEF4O60810 478 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 TFPIP10646 304 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 ERGP11308 486 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 AMY2BP19961 511 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 CNR1P21554 472 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 PSMB5P28074 263 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 SDHAP31040 664 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 PSMB10P40306 273 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 S100A10P60903 97 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 YPEL5P62699 121 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 GGTLC2Q14390 218 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 GNMTQ14749 295 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 ATXN7L3Q14CW9 347 aaPredicted RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 ZIC1Q15915 447 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 DUSP5Q16690 384 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 LRRC37A5PQ49AS3 106 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 PRAMEF9Q5VWM5 478 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 C18orf63Q68DL7 685 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 STAC2Q6ZMT1 411 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 TMEM91Q6ZNR0 172 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 GRASPQ7Z6J2 395 aaPredicted RBP3.24□□□□□ -1.89
VMP1-216ENST00000592790 TMEM200AQ86VY9 491 aa3.24□□□□□ -1.89
VMP1-216ENST00000592790 SERPINA12Q8IW75 414 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms