RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ENTPD5O75356 428 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 ZNF432O94892 652 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 IGF2P01344 180 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 F13BP05160 661 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 ASAH2BP0C7U1 165 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 HOXB1P14653 301 aaPredicted RBP8.83□□□□□ -1
BRCA1-227ENST00000591849 RHCEP18577 417 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 CD53P19397 219 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 DAP3P51398 398 aaKnown RBP8.83□□□□□ -1
BRCA1-227ENST00000591849 CDH11P55287 796 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 CLRN1P58418 232 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 RPL18Q07020 188 aaKnown RBP8.83□□□□□ -1
BRCA1-227ENST00000591849 MELKQ14680 651 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 LAPTM4AQ15012 233 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 SLC46A3Q7Z3Q1 461 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 OAFQ86UD1 273 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 NRMQ8IXM6 262 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 TMEM123Q8N131 208 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 ARHGAP24Q8N264 748 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 WDR31Q8NA23 367 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 RBM15BQ8NDT2 890 aaKnown RBP8.83□□□□□ -1
BRCA1-227ENST00000591849 OR6X1Q8NH79 312 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 ACOT11Q8WXI4 607 aaPredicted RBP8.83□□□□□ -1
BRCA1-227ENST00000591849 BCL2L2Q92843 193 aaPredicted RBP8.83□□□□□ -1
BRCA1-227ENST00000591849 FBXW5Q969U6 566 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 LRR1Q96L50 414 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 LRGUKQ96M69 825 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 NMNAT1Q9HAN9 279 aaPredicted RBP8.83□□□□□ -1
BRCA1-227ENST00000591849 C20orf141Q9NUB4 165 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 FAIMQ9NVQ4 179 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 CISD1Q9NZ45 108 aaKnown RBP8.83□□□□□ -1
BRCA1-227ENST00000591849 STX18Q9P2W9 335 aaKnown RBP8.83□□□□□ -1
BRCA1-227ENST00000591849 CD300AQ9UGN4 299 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 ATP23Q9Y6H3 246 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 NAV3Q8IVL0 2385 aa8.83□□□□□ -1
BRCA1-227ENST00000591849 AKAP6Q13023 2319 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 ZNF99A8MXY4 864 aaPredicted RBP8.82□□□□□ -1
BRCA1-227ENST00000591849 RPL36A-HNRNPH2H7BZ11 118 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 FFAR1O14842 300 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 DIRAS1O95057 198 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 IGHG1P01857 330 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 FABP3P05413 133 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 CD79AP11912 226 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 CD40P25942 277 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 LOXP28300 417 aaPredicted RBP8.82□□□□□ -1
BRCA1-227ENST00000591849 RPL4P36578 427 aaKnown RBP8.82□□□□□ -1
BRCA1-227ENST00000591849 GUCA1AP43080 201 aaPredicted RBP8.82□□□□□ -1
BRCA1-227ENST00000591849 ZNF84P51523 738 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 TUBA1BP68363 451 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 TUBA4AP68366 448 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 SPIBQ01892 262 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 PRKCDQ05655 676 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 TOP3AQ13472 1001 aaPredicted RBP8.82□□□□□ -1
BRCA1-227ENST00000591849 ZNF672Q499Z4 452 aaPredicted RBP8.82□□□□□ -1
BRCA1-227ENST00000591849 ALG10Q5BKT4 473 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 CYP2R1Q6VVX0 501 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 SPNS3Q6ZMD2 512 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 ZNF813Q6ZN06 617 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 RINLQ6ZS11 566 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 MBOAT2Q6ZWT7 520 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 TUBA1AQ71U36 451 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 LINGO2Q7L985 606 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 TRPM8Q7Z2W7 1104 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 CCDC36Q8IYA8 594 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 ZNF611Q8N823 705 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 KBTBD8Q8NFY9 601 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 OR52J3Q8NH60 311 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 OR51A7Q8NH64 312 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 MOSPD2Q8NHP6 518 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 MAGEE2Q8TD90 523 aaPredicted RBP8.82□□□□□ -1
BRCA1-227ENST00000591849 SMAP2Q8WU79 429 aaPredicted RBP8.82□□□□□ -1
BRCA1-227ENST00000591849 NANOS1Q8WY41 292 aaKnown RBP8.82□□□□□ -1
BRCA1-227ENST00000591849 GTPBP3Q969Y2 492 aaKnown RBP8.82□□□□□ -1
BRCA1-227ENST00000591849 MBD6Q96DN6 1003 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 SLC25A44Q96H78 314 aaPredicted RBP8.82□□□□□ -1
BRCA1-227ENST00000591849 ALPK1Q96QP1 1244 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 PIP5K1AQ99755 562 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 TMEM204Q9BSN7 226 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 ANKRD19PQ9H560 264 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 CXorf56Q9H5V9 222 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 MOV10Q9HCE1 1003 aaKnown RBP8.82□□□□□ -1
BRCA1-227ENST00000591849 GLTPQ9NZD2 209 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 NPAP1Q9NZP6 1156 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 TMCC3Q9ULS5 477 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 AURKCQ9UQB9 309 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 LAMP3Q9UQV4 416 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 TMEM5Q9Y2B1 443 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 ZFHX3Q15911 3703 aa8.82□□□□□ -1
BRCA1-227ENST00000591849 NF1P21359 2839 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 FREM1Q5H8C1 2179 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 A0A087WUU8 490 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 ARPC4-TTLL3A0A0A6YYG9 625 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 VSTM5A8MXK1 200 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 GYG2O15488 501 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 SEC14L2O76054 403 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 GADD45GO95257 159 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 FARS2O95363 451 aaKnown RBP8.81□□□□□ -1
BRCA1-227ENST00000591849 CRYAAP02489 173 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 QDPRP09417 244 aa8.81□□□□□ -1
BRCA1-227ENST00000591849 NR2C1P13056 603 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms