RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 FKBP7Q9Y680 259 aa9.03□□□□□ -0.96
VPS4B-207ENST00000591519 BBIP1A8MTZ0 92 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 VSTM5A8MXK1 200 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 FXYD1O00168 92 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 PHF1O43189 567 aaPredicted RBP9.02□□□□□ -0.97
VPS4B-207ENST00000591519 OPN1SWP03999 348 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 OR4A8P0C604 315 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 CALCRP30988 508 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 PRKAR1BP31321 381 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 RPS5P46782 204 aaKnown RBP9.02□□□□□ -0.97
VPS4B-207ENST00000591519 PPOXP50336 477 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 CLDN17P56750 224 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 ARF1P84077 181 aaKnown RBP9.02□□□□□ -0.97
VPS4B-207ENST00000591519 ROR2Q01974 943 aaKnown RBP9.02□□□□□ -0.97
VPS4B-207ENST00000591519 HGFACQ04756 655 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 ADRM1Q16186 407 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 NKAPLQ5M9Q1 402 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 NANOGP8Q6NSW7 305 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 NHLRC1Q6VVB1 395 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 H1FNTQ75WM6 255 aaPredicted RBP9.02□□□□□ -0.97
VPS4B-207ENST00000591519 KRT73Q86Y46 540 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 PCYOX1LQ8NBM8 494 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 HIPK4Q8NE63 616 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 OR6S1Q8NH40 331 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 DNAJA4Q8WW22 397 aaPredicted RBP9.02□□□□□ -0.97
VPS4B-207ENST00000591519 TAAR8Q969N4 342 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 SLC25A36Q96CQ1 311 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 ALKBH3Q96Q83 286 aaPredicted RBP9.02□□□□□ -0.97
VPS4B-207ENST00000591519 DOK1Q99704 481 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 KCNS3Q9BQ31 491 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 ECSITQ9BQ95 431 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 SHARPINQ9H0F6 387 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 NANOGQ9H9S0 305 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 GPR35Q9HC97 309 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 MRGBPQ9NV56 204 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 GID8Q9NWU2 228 aa9.02□□□□□ -0.97
VPS4B-207ENST00000591519 IGKV1D-42A0A075B6H8 117 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 A0A096LPE4 126 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 IGHV4-61A0A0C4DH41 118 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 A0A1W2PPZ6 126 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 TMEM129A0AVI4 362 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 ADARB2-AS1A8MUL3 147 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 MS4A18H0YCH9 400 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 TPST1O60507 370 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 SLC43A1O75387 559 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 GIFP27352 417 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 ARR3P36575 388 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 IDH3GP51553 393 aaPredicted RBP9.01□□□□□ -0.97
VPS4B-207ENST00000591519 POU3F1Q03052 451 aaPredicted RBP9.01□□□□□ -0.97
VPS4B-207ENST00000591519 MFSD13AQ14CX5 517 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 MS4A18Q3C1V0 323 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 GLIPR1L2Q4G1C9 344 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 FAM69AQ5T7M9 428 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 FAM91A1Q658Y4 838 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 ULK3Q6PHR2 472 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 DHRS4L2Q6PKH6 230 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 ZNF627Q7L945 461 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 COMTD1Q86VU5 262 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 SMYD1Q8NB12 490 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 C11orf65Q8NCR3 313 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 ADPRHL1Q8NDY3 354 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 RP9Q8TA86 221 aaKnown RBP9.01□□□□□ -0.97
VPS4B-207ENST00000591519 NEU4Q8WWR8 484 aaPredicted RBP9.01□□□□□ -0.97
VPS4B-207ENST00000591519 SLC38A4Q969I6 547 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 MSI2Q96DH6 328 aaKnown RBP9.01□□□□□ -0.97
VPS4B-207ENST00000591519 SLC41A3Q96GZ6 507 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 HSH2DQ96JZ2 352 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 LRR1Q96L50 414 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 ZNF607Q96SK3 696 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 VRK1Q99986 396 aaPredicted RBP9.01□□□□□ -0.97
VPS4B-207ENST00000591519 PIMREGQ9BSJ6 248 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 RAB1BQ9H0U4 201 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 TMEM38AQ9H6F2 299 aa9.01□□□□□ -0.97
VPS4B-207ENST00000591519 KAT8Q9H7Z6 458 aaKnown RBP9.01□□□□□ -0.97
VPS4B-207ENST00000591519 TRAV36DV7A0A075B6V5 113 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 A0A087WUJ7 227 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 LOC100289279A0A1B0GTE1 492 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 A0A1B0GWA3 101 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 ZNF99A8MXY4 864 aaPredicted RBP9□□□□□ -0.97
VPS4B-207ENST00000591519 SLC22A2O15244 555 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 TRAF3IP2O43734 574 aaPredicted RBP9□□□□□ -0.97
VPS4B-207ENST00000591519 STAMBPO95630 424 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 TACSTD2P09758 323 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 ZNF23P17027 643 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 NPR2P20594 1047 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 IGFBP5P24593 272 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 HTR2AP28223 471 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 GTF2E2P29084 291 aaKnown RBP9□□□□□ -0.97
VPS4B-207ENST00000591519 THBS4P35443 961 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 NUDT2P50583 147 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 TUBA1BP68363 451 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 TUBA4AP68366 448 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 GGTLC2Q14390 218 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 CEACAM16Q2WEN9 425 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 COQ5Q5HYK3 327 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 FAM166AQ6J272 317 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 TUBA1AQ71U36 451 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 SLC46A3Q7Z3Q1 461 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 ARMC8Q8IUR7 673 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 TMEM123Q8N131 208 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms