RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 DAP3P51398 398 aaKnown RBP10.44□□□□□ -0.74
LIG3-213ENST00000590630 BIDP55957 195 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 LSM11P83369 360 aaKnown RBP eCLIP10.44□□□□□ -0.74
LIG3-213ENST00000590630 BNIP1Q12981 228 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 CAMK2DQ13557 499 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 CARD17Q5XLA6 110 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 ANKRD16Q6P6B7 361 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 PODNL1Q6PEZ8 512 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 KLHL24Q6TFL4 600 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 TMPRSS11FQ6ZWK6 438 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 PIWIL3Q7Z3Z3 882 aaKnown RBP10.44□□□□□ -0.74
LIG3-213ENST00000590630 OAFQ86UD1 273 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 ZDHHC21Q8IVQ6 265 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 OR1K1Q8NGR3 316 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 OR6N1Q8NGY5 312 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 OR52N5Q8NH56 324 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 NINJ1Q92982 152 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 ZNF566Q969W8 418 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 SLC7A6OSQ96CW6 309 aaPredicted RBP10.44□□□□□ -0.74
LIG3-213ENST00000590630 SLC25A44Q96H78 314 aaPredicted RBP10.44□□□□□ -0.74
LIG3-213ENST00000590630 CLPTM1LQ96KA5 538 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 HS3ST6Q96QI5 342 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 BTBD10Q9BSF8 475 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 TMEM204Q9BSN7 226 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 MAGIXQ9H6Y5 334 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 GPR35Q9HC97 309 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 KRCC1Q9NPI7 259 aaPredicted RBP10.44□□□□□ -0.74
LIG3-213ENST00000590630 SLC17A5Q9NRA2 495 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 INIPQ9NRY2 104 aa10.44□□□□□ -0.74
LIG3-213ENST00000590630 STX18Q9P2W9 335 aaKnown RBP10.44□□□□□ -0.74
LIG3-213ENST00000590630 MAGED1Q9Y5V3 778 aaPredicted RBP10.44□□□□□ -0.74
LIG3-213ENST00000590630 TCRBV5S2A0A599 114 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 ZNF99A8MXY4 864 aaPredicted RBP10.43□□□□□ -0.74
LIG3-213ENST00000590630 MCIDASD6RGH6 385 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 M0R3G1 203 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 CLOCKO15516 846 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 ATP5HO75947 161 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 DIRAS1O95057 198 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 GADD45GO95257 159 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 WNT11O96014 354 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 F13BP05160 661 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 CD3EP07766 207 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 HOXB1P14653 301 aaPredicted RBP10.43□□□□□ -0.74
LIG3-213ENST00000590630 MAGEA2P43356 314 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 CSNK1A1P48729 337 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 RASSF2P50749 326 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 PRPS1P60891 318 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 MS4A2Q01362 244 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 SPIBQ01892 262 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 BSPH1Q075Z2 132 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 TRAP1Q12931 704 aaKnown RBP10.43□□□□□ -0.74
LIG3-213ENST00000590630 TAF11Q15544 211 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 CEACAM16Q2WEN9 425 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 ALG10Q5BKT4 473 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 NCMAPQ5T1S8 102 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 TBPL2Q6SJ96 375 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 KLHL17Q6TDP4 642 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 PAMR1Q6UXH9 720 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 ZNF704Q6ZNC4 412 aaPredicted RBP10.43□□□□□ -0.74
LIG3-213ENST00000590630 WDR31Q8NA23 367 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 OR4K5Q8NGD3 323 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 OR52J3Q8NH60 311 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 MAGEE2Q8TD90 523 aaPredicted RBP10.43□□□□□ -0.74
LIG3-213ENST00000590630 NRGNQ92686 78 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 LRGUKQ96M69 825 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 SEPHS2Q99611 448 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 FUZQ9BT04 418 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 ULBP2Q9BZM5 246 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 TRIM15Q9C019 465 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 MOV10Q9HCE1 1003 aaKnown RBP10.43□□□□□ -0.74
LIG3-213ENST00000590630 NPAP1Q9NZP6 1156 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 ST6GALNAC2Q9UJ37 374 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 RNF115Q9Y4L5 304 aa10.43□□□□□ -0.74
LIG3-213ENST00000590630 ARPC4-TTLL3A0A0A6YYG9 625 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 TRBV4-1A0A0J9YWV2 114 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 SH3PXD2BA1X283 911 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 CENPBD1B2RD01 187 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 CDC42EP2O14613 210 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 ACOT8O14734 319 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 DNAJC8O75937 253 aaPredicted RBP10.42□□□□□ -0.74
LIG3-213ENST00000590630 KRT36O76013 467 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 IGHG1P01857 330 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 RAF1P04049 648 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 PGA4P0DJD7 388 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 PGA3P0DJD8 388 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 HOXB6P17509 224 aaKnown RBP10.42□□□□□ -0.74
LIG3-213ENST00000590630 PTAFRP25105 342 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 GPR4P46093 362 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 UBE2NP61088 152 aaKnown RBP10.42□□□□□ -0.74
LIG3-213ENST00000590630 ARF1P84077 181 aaKnown RBP10.42□□□□□ -0.74
LIG3-213ENST00000590630 MELKQ14680 651 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 LAPTM4AQ15012 233 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 SEC23BQ15437 767 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 ACKR1Q16570 336 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 TBRG1Q3YBR2 411 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 FAM98BQ52LJ0 330 aaKnown RBP10.42□□□□□ -0.74
LIG3-213ENST00000590630 HIKESHIQ53FT3 197 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 PHYHD1Q5SRE7 291 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 PGM2L1Q6PCE3 622 aa10.42□□□□□ -0.74
LIG3-213ENST00000590630 TMEM108Q6UXF1 575 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms