RNA–Protein interactions for RNA: ENST00000589055.3

TMEM259-206, Transcript of transmembrane protein 259, human

TSL 3

Gene TMEM259, Length 791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-206	ENST00000589055	CHRNB3	Q05901	458 aa		13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	MMEL1	Q495T6	779 aa		13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	C1QTNF12	Q5T7M4	302 aa		13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	INTS11	Q5TA45	600 aa	Known RBP	13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	ZNF813	Q6ZN06	617 aa		13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	DEF8	Q6ZN54	512 aa		13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	CCDC80	Q76M96	950 aa		13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	SLC46A3	Q7Z3Q1	461 aa		13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	SLC30A8	Q8IWU4	369 aa		13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	POU5F2	Q8N7G0	328 aa		13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	OR6N1	Q8NGY5	312 aa		13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	MS4A3	Q96HJ5	214 aa		13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	PRSS27	Q9BQR3	290 aa		13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	ULBP2	Q9BZM5	246 aa		13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	YAE1D1	Q9NRH1	226 aa		13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	ZNF224	Q9NZL3	707 aa		13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	ARMCX1	Q9P291	453 aa		13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	SH3GLB1	Q9Y371	365 aa		13.85	□□□□□ -0.19
TMEM259-206	ENST00000589055	ZNF726	A6NNF4	738 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	RNF212B	A8MTL3	300 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	CD5L	O43866	347 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	MT-ATP6	P00846	226 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	CD79A	P11912	226 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	THBS4	P35443	961 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	SERPINF1	P36955	418 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	OR1E2	P47887	323 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	EFNA4	P52798	201 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	UGT2B15	P54855	530 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	SNRPD2	P62316	118 aa	Known RBP	13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	PIGF	Q07326	219 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	TTC33	Q6PID6	262 aa	Predicted RBP	13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	PXK	Q7Z7A4	578 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	NKAIN4	Q8IVV8	208 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	OR8J3	Q8NGG0	315 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	PFN4	Q8NHR9	129 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	C10orf105	Q8TEF2	133 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	FAM168A	Q92567	244 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	ZNF583	Q96ND8	569 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	ECSIT	Q9BQ95	431 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	ZNF426	Q9BUY5	554 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	PCDHAC1	Q9H158	963 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	MEPE	Q9NQ76	525 aa	Predicted RBP	13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	TAS2R5	Q9NYW4	299 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	PMF1-BGLAP	U3KQ54	211 aa		13.84	□□□□□ -0.19
TMEM259-206	ENST00000589055	CHD3	Q12873	2000 aa	Known RBP	13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	RNF13	O43567	381 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	CRLF1	O75462	422 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	OR6A2	O95222	327 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	TP53	P04637	393 aa	Predicted RBP	13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	PATE4	P0C8F1	98 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	UMPS	P11172	480 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	HOXB1	P14653	301 aa	Predicted RBP	13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	FUT4	P22083	530 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	CSNK1A1	P48729	337 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	MSMP	Q1L6U9	139 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	C3orf36	Q3SXR2	165 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	LRRC23	Q53EV4	343 aa	Predicted RBP	13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	COQ5	Q5HYK3	327 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	KRT80	Q6KB66	452 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	SLC35D2	Q76EJ3	337 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	PHC2	Q8IXK0	858 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	FAM169B	Q8N8A8	192 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	FGFBP3	Q8TAT2	258 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	TMEM255B	Q8WV15	326 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	C10orf82	Q8WW14	230 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	PROX1	Q92786	737 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	RCN3	Q96D15	328 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	LRR1	Q96L50	414 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	FOXB1	Q99853	325 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	VRK1	Q99986	396 aa	Predicted RBP	13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	NANS	Q9NR45	359 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	B3GNT2	Q9NY97	397 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	POFUT2	Q9Y2G5	429 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	CAPN7	Q9Y6W3	813 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	CUBN	O60494	3623 aa		13.83	□□□□□ -0.2
TMEM259-206	ENST00000589055	BBIP1	A8MTZ0	92 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	PIP5K1C	O60331	668 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	ASAH2B	P0C7U1	165 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	ARR3	P36575	388 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	SNTB2	Q13425	540 aa	Known RBP	13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	PIN1	Q13526	163 aa	Predicted RBP	13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	MAPRE2	Q15555	327 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	CARTPT	Q16568	116 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	TMEM249	Q2WGJ8	235 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	NANOGNB	Q7Z5D8	188 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	SVOPL	Q8N434	492 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	NUP37	Q8NFH4	326 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	OR4F15	Q8NGB8	312 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	TMEM54	Q969K7	222 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	MPP4	Q96JB8	637 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	ZNF75A	Q96N20	296 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	SH3GL1	Q99961	368 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	PLK3	Q9H4B4	646 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	B3GAT2	Q9NPZ5	323 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	C20orf141	Q9NUB4	165 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	MXRA5	Q9NR99	2828 aa		13.82	□□□□□ -0.2
TMEM259-206	ENST00000589055	FAM220BP	B1ANY3	271 aa		13.81	□□□□□ -0.2
TMEM259-206	ENST00000589055		B9A039	149 aa		13.81	□□□□□ -0.2

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