RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ZNF726A6NNF4 738 aa17.74■□□□□ 0.43
DDX39A-207ENST00000588542 CLOCKO15516 846 aa17.74■□□□□ 0.43
DDX39A-207ENST00000588542 SLC9A3P48764 834 aa17.74■□□□□ 0.43
DDX39A-207ENST00000588542 HMGA2P52926 109 aa17.74■□□□□ 0.43
DDX39A-207ENST00000588542 ROR2Q01974 943 aaKnown RBP17.74■□□□□ 0.43
DDX39A-207ENST00000588542 FLOT2Q14254 428 aa17.74■□□□□ 0.43
DDX39A-207ENST00000588542 STK11Q15831 433 aa17.74■□□□□ 0.43
DDX39A-207ENST00000588542 OAFQ86UD1 273 aa17.74■□□□□ 0.43
DDX39A-207ENST00000588542 P2RY8Q86VZ1 359 aa17.74■□□□□ 0.43
DDX39A-207ENST00000588542 GPR137CQ8N3F9 429 aa17.74■□□□□ 0.43
DDX39A-207ENST00000588542 LRRC75AQ8NAA5 344 aa17.74■□□□□ 0.43
DDX39A-207ENST00000588542 C1orf162Q8NEQ5 155 aaPredicted RBP17.74■□□□□ 0.43
DDX39A-207ENST00000588542 OR51A7Q8NH64 312 aa17.74■□□□□ 0.43
DDX39A-207ENST00000588542 CANT1Q8WVQ1 401 aa17.74■□□□□ 0.43
DDX39A-207ENST00000588542 BOD1Q96IK1 185 aa17.74■□□□□ 0.43
DDX39A-207ENST00000588542 LURAP1Q96LR2 239 aa17.74■□□□□ 0.43
DDX39A-207ENST00000588542 ADAD1Q96M93 576 aaKnown RBP17.74■□□□□ 0.43
DDX39A-207ENST00000588542 ALPK1Q96QP1 1244 aa17.74■□□□□ 0.43
DDX39A-207ENST00000588542 GPA33Q99795 319 aa17.74■□□□□ 0.43
DDX39A-207ENST00000588542 GPR35Q9HC97 309 aa17.74■□□□□ 0.43
DDX39A-207ENST00000588542 LYVE1Q9Y5Y7 322 aa17.74■□□□□ 0.43
DDX39A-207ENST00000588542 RAP2AP10114 183 aa17.73■□□□□ 0.43
DDX39A-207ENST00000588542 ZNF26P17031 533 aaPredicted RBP17.73■□□□□ 0.43
DDX39A-207ENST00000588542 TGFBR3Q03167 851 aa17.73■□□□□ 0.43
DDX39A-207ENST00000588542 ACKR1Q16570 336 aa17.73■□□□□ 0.43
DDX39A-207ENST00000588542 ANKDD1AQ495B1 522 aa17.73■□□□□ 0.43
DDX39A-207ENST00000588542 ALG10Q5BKT4 473 aa17.73■□□□□ 0.43
DDX39A-207ENST00000588542 OR7E24Q6IFN5 339 aa17.73■□□□□ 0.43
DDX39A-207ENST00000588542 ZER1Q7Z7L7 766 aa17.73■□□□□ 0.43
DDX39A-207ENST00000588542 WDR31Q8NA23 367 aa17.73■□□□□ 0.43
DDX39A-207ENST00000588542 ASB10Q8WXI3 467 aa17.73■□□□□ 0.43
DDX39A-207ENST00000588542 POLDIP3Q9BY77 421 aaKnown RBP17.73■□□□□ 0.43
DDX39A-207ENST00000588542 CLEC4MQ9H2X3 399 aaPredicted RBP17.73■□□□□ 0.43
DDX39A-207ENST00000588542 VNN3Q9NY84 501 aa17.73■□□□□ 0.43
DDX39A-207ENST00000588542 SPG11Q96JI7 2443 aa17.73■□□□□ 0.43
DDX39A-207ENST00000588542 RAI1Q7Z5J4 1906 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-207ENST00000588542 AKAP6Q13023 2319 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 A0A1W2PRG6 482 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 TCRBV3S1A0A5B6 114 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 DHRS12A0PJE2 317 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 NPIPB13A6NJU9 1138 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 NPIPB4C9JG80 1138 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 M0R3G1 203 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 PTP4A3O75365 173 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 KRT36O76013 467 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 BCL10O95999 233 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 PGA4P0DJD7 388 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 PGA3P0DJD8 388 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 CDH2P19022 906 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-207ENST00000588542 RUNX1T1Q06455 604 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 PPA1Q15181 289 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 CEACAM16Q2WEN9 425 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 ZBED5Q49AG3 693 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 ARMC4Q5T2S8 1044 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 ALKBH2Q6NS38 261 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 HMBOX1Q6NT76 420 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 ASRGL1Q7L266 308 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 CDC20BQ86Y33 519 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 OR4C15Q8NGM1 316 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 OR1K1Q8NGR3 316 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 TMEM54Q969K7 222 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 PIK3IP1Q96FE7 263 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 SLC25A44Q96H78 314 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-207ENST00000588542 HS3ST6Q96QI5 342 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 MMADHCQ9H3L0 296 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-207ENST00000588542 NELFAQ9H3P2 528 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 CRLF2Q9HC73 371 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 SLC17A5Q9NRA2 495 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 SLC25A15Q9Y619 301 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 CADP27708 2225 aa17.72■□□□□ 0.43
DDX39A-207ENST00000588542 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.71■□□□□ 0.43
DDX39A-207ENST00000588542 A0A1W2PR80 420 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 IGHMP01871 453 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 CSNK1A1P48729 337 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 HIKESHIQ53FT3 197 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 BEX5Q5H9J7 111 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 OR2T5Q6IEZ7 315 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 CCDC121Q6ZUS5 278 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 IGFN1Q86VF2 1251 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 SPATA24Q86W54 205 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 C17orf78Q8N4C9 275 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 OR2T29Q8NH02 315 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 OR52N5Q8NH56 324 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 BCL2L2Q92843 193 aaPredicted RBP17.71■□□□□ 0.43
DDX39A-207ENST00000588542 ZNF566Q969W8 418 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 MUCL1Q96DR8 90 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 CHID1Q9BWS9 393 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 MRPL13Q9BYD1 178 aaKnown RBP17.71■□□□□ 0.43
DDX39A-207ENST00000588542 TXNIPQ9H3M7 391 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 NPAP1Q9NZP6 1156 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 TMCC3Q9ULS5 477 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 AURKCQ9UQB9 309 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 SIGLEC7Q9Y286 467 aa17.71■□□□□ 0.43
DDX39A-207ENST00000588542 HEATR1Q9H583 2144 aaKnown RBP17.71■□□□□ 0.42
DDX39A-207ENST00000588542 MCIDASD6RGH6 385 aa17.7■□□□□ 0.42
DDX39A-207ENST00000588542 TNFRSF11BO00300 401 aa17.7■□□□□ 0.42
DDX39A-207ENST00000588542 DAP3P51398 398 aaKnown RBP17.7■□□□□ 0.42
DDX39A-207ENST00000588542 SH3BGRP55822 239 aaPredicted RBP17.7■□□□□ 0.42
DDX39A-207ENST00000588542 FXYD6P3P58550 94 aa17.7■□□□□ 0.42
DDX39A-207ENST00000588542 CTXN1P60606 82 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms