RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 ZNF730Q6ZMV8 503 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 TUBA1AQ71U36 451 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 NRMQ8IXM6 262 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 OR6X1Q8NH79 312 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 LILRB1Q8NHL6 650 aaPredicted RBP12.96□□□□□ -0.33
ATG4D-207ENST00000587256 MAGEE2Q8TD90 523 aaPredicted RBP12.96□□□□□ -0.33
ATG4D-207ENST00000587256 BPIFA2Q96DR5 249 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 PERPQ96FX8 193 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 LRR1Q96L50 414 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 NSMCE2Q96MF7 247 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 KCNS3Q9BQ31 491 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 NELFAQ9H3P2 528 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 MAN2C1Q9NTJ4 1040 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 DCAF13Q9NV06 445 aaKnown RBP12.96□□□□□ -0.33
ATG4D-207ENST00000587256 FAIMQ9NVQ4 179 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 FAM32AQ9Y421 112 aaKnown RBP12.96□□□□□ -0.33
ATG4D-207ENST00000587256 ENPP4Q9Y6X5 453 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 ITPR3Q14573 2671 aa12.96□□□□□ -0.33
ATG4D-207ENST00000587256 CADP27708 2225 aa12.96□□□□□ -0.34
ATG4D-207ENST00000587256 TEP1Q99973 2627 aaKnown RBP12.95□□□□□ -0.34
ATG4D-207ENST00000587256 HIVEP1P15822 2718 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 ARPC4-TTLL3A0A0A6YYG9 625 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 ZNF99A8MXY4 864 aaPredicted RBP12.95□□□□□ -0.34
ATG4D-207ENST00000587256 hCG_2039718K7EN88 272 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 FFAR1O14842 300 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 ARPC2O15144 300 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 ARHGEF9O43307 516 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 BCL10O95999 233 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 F13BP05160 661 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 MSX2P35548 267 aaPredicted RBP12.95□□□□□ -0.34
ATG4D-207ENST00000587256 AQP2P41181 271 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 DAP3P51398 398 aaKnown RBP12.95□□□□□ -0.34
ATG4D-207ENST00000587256 FGD3Q5JSP0 725 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 Q5PR19 223 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 NHLRC1Q6VVB1 395 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 HDDC2Q7Z4H3 204 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 TGIF2LYQ8IUE0 185 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 WDFY1Q8IWB7 410 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 FAM86B1Q8N7N1 296 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 SMAP2Q8WU79 429 aaPredicted RBP12.95□□□□□ -0.34
ATG4D-207ENST00000587256 ACOT11Q8WXI4 607 aaPredicted RBP12.95□□□□□ -0.34
ATG4D-207ENST00000587256 ZNF566Q969W8 418 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 ZNF837Q96EG3 531 aaPredicted RBP12.95□□□□□ -0.34
ATG4D-207ENST00000587256 BOD1Q96IK1 185 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 MOV10Q9HCE1 1003 aaKnown RBP12.95□□□□□ -0.34
ATG4D-207ENST00000587256 INIPQ9NRY2 104 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 CISD1Q9NZ45 108 aaKnown RBP12.95□□□□□ -0.34
ATG4D-207ENST00000587256 ADAM21Q9UKJ8 722 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 POFUT2Q9Y2G5 429 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 DSCAMO60469 2012 aa12.95□□□□□ -0.34
ATG4D-207ENST00000587256 HTR3EA5X5Y0 456 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 B2RBV5 119 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 ATP6V1G2-DDX39BF2Z307 99 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 IGHG1P01857 330 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 B4GALT1P15291 398 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 FUT4P22083 530 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 PAX7P23759 505 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 CLRN1P58418 232 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 LSM11P83369 360 aaKnown RBP eCLIP12.94□□□□□ -0.342e-15■□□□□ 8.5
ATG4D-207ENST00000587256 FXNQ16595 210 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 ZNF813Q6ZN06 617 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 RRM2BQ7LG56 351 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 MEX3DQ86XN8 651 aaKnown RBP12.94□□□□□ -0.34
ATG4D-207ENST00000587256 LRRC75A-AS1Q8N1F1 130 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 WFDC11Q8NEX6 87 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 MOSPD2Q8NHP6 518 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 LIPHQ8WWY8 451 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 GTPBP3Q969Y2 492 aaKnown RBP12.94□□□□□ -0.34
ATG4D-207ENST00000587256 SLC25A44Q96H78 314 aaPredicted RBP12.94□□□□□ -0.34
ATG4D-207ENST00000587256 NSL1Q96IY1 281 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 SLC38A2Q96QD8 506 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 ANKRD19PQ9H560 264 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 GORASP2Q9H8Y8 452 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 FAM53CQ9NYF3 392 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 GLTPQ9NZD2 209 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 ATP23Q9Y6H3 246 aa12.94□□□□□ -0.34
ATG4D-207ENST00000587256 IGHV1-18A0A0C4DH31 117 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 EFCAB9A8MZ26 197 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 TMCC2O75069 709 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 PRSS23O95084 383 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 H1F0P07305 194 aaKnown RBP12.93□□□□□ -0.34
ATG4D-207ENST00000587256 SOD3P08294 240 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 DANCRP0C864 163 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 HOXB1P14653 301 aaPredicted RBP12.93□□□□□ -0.34
ATG4D-207ENST00000587256 RHCEP18577 417 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 MAKP20794 623 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 CALB2P22676 271 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 GPR4P46093 362 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 PTH2RP49190 550 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 ADAM8P78325 824 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 NPRL3Q12980 569 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 TOP3AQ13472 1001 aaPredicted RBP12.93□□□□□ -0.34
ATG4D-207ENST00000587256 SPATS1Q496A3 300 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 ALG10Q5BKT4 473 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 SHEQ5VZ18 495 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 B3GLCTQ6Y288 498 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 CDK20Q8IZL9 346 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 NOXO1Q8NFA2 376 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 IGFBPL1Q8WX77 278 aa12.93□□□□□ -0.34
ATG4D-207ENST00000587256 NANOS1Q8WY41 292 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms