RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 CAB39Q9Y376 341 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-204ENST00000586417 SPIN1Q9Y657 262 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-204ENST00000586417 PKD1L2Q7Z442 2459 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 TMEM8BA6NDV4 472 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 MS4A18H0YCH9 400 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 AHCYP23526 432 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 DPP4P27487 766 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 DSCR4P56555 118 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-204ENST00000586417 ACSM1Q08AH1 577 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 C19orf57Q0VDD7 668 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 ZP4Q12836 540 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 MYBPHQ13203 477 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 TPBGQ13641 420 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 GALEQ14376 348 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 MS4A18Q3C1V0 323 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 POMGNT2Q8NAT1 580 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 SMAP2Q8WU79 429 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-204ENST00000586417 ZFAND2BQ8WV99 257 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 SNRNP27Q8WVK2 155 aaKnown RBP18.35■□□□□ 0.53
ATG4D-204ENST00000586417 SPRYD4Q8WW59 207 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-204ENST00000586417 TSSK2Q96PF2 358 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 CHCHD6Q9BRQ6 235 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 ALG8Q9BVK2 526 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 TXNIPQ9H3M7 391 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 CSAG2Q9Y5P2 127 aa18.35■□□□□ 0.53
ATG4D-204ENST00000586417 LOC100506127A0A0U1RQW1 187 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 DAPL1A0PJW8 107 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 H7C1C5 153 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 GPX5O75715 221 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 GLCEO94923 617 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 OR6A2O95222 327 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 PLGP00747 810 aaPredicted RBP18.34■□□□□ 0.53
ATG4D-204ENST00000586417 P04436 131 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 SHC1P29353 583 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 DNASE1L1P49184 302 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 RPS3AP61247 264 aaKnown RBP18.34■□□□□ 0.53
ATG4D-204ENST00000586417 RPL27P61353 136 aaKnown RBP18.34■□□□□ 0.53
ATG4D-204ENST00000586417 LCN6P62502 163 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 ZNF85Q03923 595 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 PUDPQ08623 228 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 SELENBP1Q13228 472 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 TIMM50Q3ZCQ8 353 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 GLYR1Q49A26 553 aaPredicted RBP18.34■□□□□ 0.53
ATG4D-204ENST00000586417 H1FNTQ75WM6 255 aaPredicted RBP18.34■□□□□ 0.53
ATG4D-204ENST00000586417 CNN2Q99439 309 aaKnown RBP18.34■□□□□ 0.53
ATG4D-204ENST00000586417 HES7Q9BYE0 225 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 RNF167Q9H6Y7 350 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 TMEM185BQ9H7F4 350 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 ISG20L2Q9H9L3 353 aaKnown RBP18.34■□□□□ 0.53
ATG4D-204ENST00000586417 SACM1LQ9NTJ5 587 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 ALKBH4Q9NXW9 302 aa18.34■□□□□ 0.53
ATG4D-204ENST00000586417 DCTN6O00399 190 aa18.33■□□□□ 0.53
ATG4D-204ENST00000586417 ZIC3O60481 467 aa18.33■□□□□ 0.53
ATG4D-204ENST00000586417 PYCR1P32322 319 aa18.33■□□□□ 0.53
ATG4D-204ENST00000586417 UGT2B10P36537 528 aa18.33■□□□□ 0.53
ATG4D-204ENST00000586417 CASRP41180 1078 aa18.33■□□□□ 0.53
ATG4D-204ENST00000586417 CRYBB2P43320 205 aa18.33■□□□□ 0.53
ATG4D-204ENST00000586417 ACTC1P68032 377 aa18.33■□□□□ 0.53
ATG4D-204ENST00000586417 ACTA1P68133 377 aa18.33■□□□□ 0.53
ATG4D-204ENST00000586417 OR1C1Q15619 314 aa18.33■□□□□ 0.53
ATG4D-204ENST00000586417 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.33■□□□□ 0.53
ATG4D-204ENST00000586417 LYPD4Q6UWN0 246 aa18.33■□□□□ 0.53
ATG4D-204ENST00000586417 SLC25A43Q8WUT9 341 aaPredicted RBP18.33■□□□□ 0.53
ATG4D-204ENST00000586417 ZHX1-C8orf76Q96EF9 292 aa18.33■□□□□ 0.53
ATG4D-204ENST00000586417 ALG12Q9BV10 488 aa18.33■□□□□ 0.53
ATG4D-204ENST00000586417 CHST11Q9NPF2 352 aa18.33■□□□□ 0.53
ATG4D-204ENST00000586417 A0A1W2PQL4 384 aaPredicted RBP18.32■□□□□ 0.52
ATG4D-204ENST00000586417 OR5H15A6NDH6 313 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 K7EM74 188 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 HLA-DOBP13765 273 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 CD97P48960 835 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 IGFL2Q6UWQ7 119 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 ADCK1Q86TW2 530 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 OR6K6Q8NGW6 343 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 TBC1D15Q8TC07 691 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 TRMT61AQ96FX7 289 aaKnown RBP18.32■□□□□ 0.52
ATG4D-204ENST00000586417 JSRP1Q96MG2 331 aaPredicted RBP18.32■□□□□ 0.52
ATG4D-204ENST00000586417 SMAD5Q99717 465 aaKnown RBP18.32■□□□□ 0.52
ATG4D-204ENST00000586417 DCSTAMPQ9H295 470 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 FANCFQ9NPI8 374 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 SF3B6Q9Y3B4 125 aaKnown RBP18.32■□□□□ 0.52
ATG4D-204ENST00000586417 ARHGEF9O43307 516 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 CBR3O75828 277 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 OPN1LWP04000 364 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 PDGFAP04085 211 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 GTF2E2P29084 291 aaKnown RBP18.32■□□□□ 0.52
ATG4D-204ENST00000586417 ACVR1BP36896 505 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 NAA10P41227 235 aaPredicted RBP18.32■□□□□ 0.52
ATG4D-204ENST00000586417 TMPRSS11AQ6ZMR5 421 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 SSX6Q7RTT6 188 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 ALPK2Q86TB3 2170 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 OR6V1Q8N148 313 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 KDM8Q8N371 416 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 RFLNBQ8N5W9 214 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 HAS2Q92819 552 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 UFD1Q92890 307 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 SNX18Q96RF0 628 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 TIMMDC1Q9NPL8 285 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 DEPPQ9NTK1 212 aa18.32■□□□□ 0.52
ATG4D-204ENST00000586417 ZMIZ1Q9ULJ6 1067 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms